BLASTP 2.1.2


Reference: Wise2 Package, Ewan Birney
BLAST like format to play well with existing parsers. Other options are available
See help on the program that generated this for other options


Query= Not specified


Search.................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value
    EM:MMENDOBA                                                    9.59    0
    EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 15.07    0
    EM:MMENDOBA                                                    12.70    0
    EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 76.75    0
    EM:MMENDOBA                                                    11.37    0
    EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 32.05    0

>EM:MMENDOBA  
          Length = 797 Reversed 1

 Score = 9.6 bits (3322), Expect = 0

Query:      165     AAGAGCAGC                                         173  
                 D  AAGAGCAGC                                              
Sbjct:      -551    AAGAGCAGC                                         -542 



>EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds.
          Length = 797 Reversed 0

 Score = 15.1 bits (5223), Expect = 0

Query:      187     GGGAGGGCTCTTTCCCAGGAGAGAGGGGGAAGGGGACAGGGTT       229  
                 B  GGG GGGC C T CCCAGGA  G GGGGG  GGGG   GGGTT            
Sbjct:      447     GGGGGGGCGCGT-CCCAGGACGGGGGGGGGGGGGGGGGGGGTT       488  



>EM:MMENDOBA  
          Length = 797 Reversed 1

 Score = 12.7 bits (4400), Expect = 0

Query:      245     GAA-GTGGACAGCATGGAGGGAG                           266  
                 C  GAA GTGGA AG  TGGAGGGAG                                
Sbjct:      -133    GAATGTGGAAAGAGTGGAGGGAG                           -110 



>EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds.
          Length = 797 Reversed 0

 Score = 76.8 bits (26601), Expect = 0

Query:      322     TTGGAGGGTTAAGCGGATGTGGCTAAGGCTGAGTCATCTAGGAGTAAAC 370  
                 C  TT GAGGGTTAAGCGGATGTGGCTAAGG TGAGTCATCTAGGAGTAAAC      
Sbjct:      359     TTAGAGGGTTAAGCGGATGTGGCTAAGGGTGAGTCATCTAGGAGTAAAC 407  


Query:      371     AAGAGGCCTTCCTTTGGGAGGAGCCA                        396  
                 C  A GAG C T CCT T GGAGG GCCA                             
Sbjct:      408     AGGAG-CTTACCTGTAGGAGGGGCCA                        432  



>EM:MMENDOBA  
          Length = 797 Reversed 1

 Score = 11.4 bits (3941), Expect = 0

Query:      424     CCAGGTGCAC                                        433  
                 D  CCAGGTGCAC                                             
Sbjct:      -503    CCAGGTGCAC                                        -493 



>EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds.
          Length = 797 Reversed 0

 Score = 32.0 bits (11107), Expect = 0

Query:      561     GGAATCCAGGAAAGGAG-GGA                             580  
                 D  GGAATCCAGGAA GGAG GGA                                  
Sbjct:      594     GGAATCCAGGAAGGGAGAGGA                             614  


                                                                           
>-----------<                                                              
                                                                           


Query:      623     GCCTCTGGCTATTCCTGGGACCAGGAAGTTTTCACTAGGATACATAACA 671  
                 B  GCCTCTG CT TTCCTGGGAC  GGA G  TTCACT G A ACA AA A      
Sbjct:      647     GCCTCTGACTGTTCCTGGGACTGGGATGGATTCACT-GAA-ACACAAGA 693  


Query:      672     CTT-TTTACACACTCACCCCAC                            692  
                 B  C T TTT C CA TC CCCCAC                                 
Sbjct:      694     CGTGTTTTCTCA-TC-CCCCAC                            713  



