BLASTP 2.1.2


Reference: Wise2 Package, Ewan Birney
BLAST like format to play well with existing parsers. Other options are available
See help on the program that generated this for other options
  Statistics from : Mott R (2000) Accurate Formula for P-values of gapped local sequence
 and profile alignments  J. Mol Biol. 300:649-659


Query= Not specified


Search.................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value
     ROA1_HUMAN                                               416.50    1.9e-53
  SW:ROA1_XENLA                                               364.50    2e-46
         Q22037                                               287.00    1.1e-37

>ROA1_HUMAN
          Length = 371 Reversed 0

 Score = 416.5 bits (833), Expect = 1.85161e-53

Query:      22      DSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKR      
                    +S  EPE +RKLFIGGL + TTDE+L++HFE+WG + D VVM+DP TKR      
Sbjct:      4       ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKR      


Query:      71      SRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGA      
                    SRGFGF+TY+    +D A  +RPHK+DGRVVEPKRAV R+D   P A        
Sbjct:      53      SRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHL      


Query:      120     TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV      
                    TVKK+FVG +K+D +E  +RDYF+ +G I  I I+ D+ +GKKRGFAFV      
Sbjct:      102     TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV      


Query:      169     EFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQ------NDQQGGGGGR      
                     FDD+D VDK+V+QK H +NG   +V+KAL KQ      + Q+G  G        
Sbjct:      151     TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSG      


Query:      212     GGPGGRAGGNRGNMGGGNYGNQNGGGNW--NNGGNNWGNNRGGNDNWGN      
                       GGR GG  GN   G  GN +G G +  + GG  +G +  G + +GN      
Sbjct:      200     NFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGN      


Query:      259     NS-FGGGG----GGGGGYGGGNNSWGNN----------NPWDNGNGGGN      
                    +  +GGGG    GG  GYG G   +GN           + ++NG G G       
Sbjct:      249     DGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGRGF      


Query:      293     FGGGGNNWNNGG--NDFGGYQ-QNYGGGPQRGGGNFNNNRMQPYQGGGG      
                     GG G+N+  GG  NDFG Y  Q+   GP +GG NF      PY GGG       
Sbjct:      298     GGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGG-NFGGRSSGPYGGGGQ      


Query:      339     FKAGGGNQGNYGGNNQGFNNGGNNR                              
                    + A   NQG YGG++   + G   R                              
Sbjct:      346     YFAKPRNQGGYGGSSSSSSYGSGRR                              



>SW:ROA1_XENLA
          Length = 365 Reversed 0

 Score = 364.5 bits (729), Expect = 1.95513e-46

Query:      26      EPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGF      
                    EPE +RKLFIGGL + TTDE+L+ HFE+WG + D VVM+DP +KRSRGF      
Sbjct:      9       EPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGF      


Query:      75      GFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKK      
                    GF+TY  +  +D A  +RPHK+DGRVVEPKRAV R+D   P A  TVKK      
Sbjct:      58      GFVTYLSTDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKK      


Query:      124     LFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDD      
                    +FVG +K+D +E  +R+YF+ +G I  I I+ D+ +GKKRGFAFV F+D      
Sbjct:      107     IFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFED      


Query:      173     YDPVDKVVLQKQHQLNGKMVDVKKALPKQ-------NDQQGGGGGR---      
                    +D VDK+V+QK H +N     V+KAL KQ       + ++ GG G          
Sbjct:      156     HDSVDKIVIQKYHTVNNHNSQVRKALSKQEMASVSGSQRERGGSGNYGS      


Query:      212     ---------GGPGGRAGGNRGNMGGGNYGNQNGGGNWNNG-GNNWGNNR      
                             GG GG  GGNRG  GGG +GN+  GG+  NG G  W          
Sbjct:      205     RGGFGNDNFGGRGGNFGGNRG--GGGGFGNRGYGGDGYNGDGQLWWQPS      


Query:      251     --GGNDNWGNNSFGG-GGGGGGGYGGGNNS--WGNNNPWDNGNGGGN-F      
                      G N  +G    GG G G GGGYGGG     +G N  +D  NGGG+ F      
Sbjct:      252     LLGWNRGYGAGQGGGYGAGQGGGYGGGGQGGGYGGNGGYDGYNGGGSGF      


Query:      294     GGGGNNWNNGG--NDFGGYQQ                                  
                     G G N+ + G  NDFG Y                                    
Sbjct:      301     SGSGGNFGSSGGYNDFGNYNS                                  



>Q22037
          Length = 346 Reversed 0

 Score = 287.0 bits (574), Expect = 1.10211e-37

Query:      22      DSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKR      
                    D+  EPE++RK+F+GGL   TTD+ ++  + ++G I D++VM+DP TKR      
Sbjct:      14      DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKR      


Query:      71      SRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGA      
                    SRGFGF+T+S  + +D A K RPH IDG+ V+PKRAVPR D +   +        
Sbjct:      63      SRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNV      


Query:      120     TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV      
                    + K+L+V  +++DH E  + +YF  +G +    I++DK T K RGF FV      
Sbjct:      112     STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV      


Query:      169     EFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQGGGGGRGGPGGR      
                     FDD+D VD+ VLQK H +NG   DV+K L K  D+            R      
Sbjct:      161     TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK--DEMSKAQMNRDRETR      


Query:      218     AGGNRGNMGGGNYGNQNGGGNWNNGGNNWGNNRGGNDNWGNNSFGGGGG      
                     G +R    GG  G   GGG W          RGG   +G    GG GG      
Sbjct:      208     GGRSRDGQRGGYNGGGGGGGGWGGPAQ-----RGGPGAYGGPGGGGQGG      


Query:      267     GGGGYGGG                                               
                     GG YGGG                                               
Sbjct:      252     YGGDYGGG                                               



