Package: tiddit
Version: 2.12.2+dfsg-1build1
Architecture: amd64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1015
Depends: libbamtools2.5.1 (>= 2.5.1+dfsg), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 11), python3 (<< 3.11), python3 (>= 3.10~), python3:any
Section: science
Priority: optional
Homepage: https://github.com/SciLifeLab/TIDDIT
Description: structural variant calling
 TIDDIT is a tool to used to identify chromosomal rearrangements using
 Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter-
 chromosomal translocations, deletions, tandem-duplications and
 inversions, using supplementary alignments as well as discordant pairs.
 .
 TIDDIT has two analysis modules. The sv mode, which is used to search
 for structural variants. And the cov mode that analyse the read depth of
 a bam file and generates a coverage report.
