Package: sourmash
Version: 4.9.4-9
Architecture: amd64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2752
Depends: python3-bitstring, python3-cachetools, python3-cffi-backend-api-min (<= 9729), python3-cffi-backend-api-max (>= 9729), python3-deprecation, python3-matplotlib, python3-numpy, python3-scipy, python3-screed, python3:any, libc6 (>= 2.34), libgcc-s1 (>= 4.2), liblzma5 (>= 5.1.1alpha+20120614), librocksdb9.11 (>= 9.11.2), libzstd1 (>= 1.5.5)
Built-Using: rust-safe-arch (= 1.0.0-2), rust-wide (= 1.6.0+ds-1)
Static-Built-Using: rust-adler2 (= 2.0.1-3), rust-aliasable (= 0.1.3-5), rust-approx (= 0.5.1-2), rust-az (= 1.3.0-1), rust-binary-merge (= 0.1.2-1), rust-buffer-redux (= 1.1.0-1), rust-bytecount (= 0.6.9-2), rust-bytemuck (= 1.25.0-1), rust-byteorder (= 1.5.0-1), rust-camino (= 1.2.2-1), rust-cfg-if (= 1.0.4-1), rust-chacha20 (= 0.10.1-1), rust-chrono (= 0.4.45-1), rust-codepage-437 (= 0.1.0-1), rust-counter (= 0.6.0-1), rust-cpufeatures (= 0.3.0-2), rust-crc32fast (= 1.5.0-2), rust-crossbeam-deque (= 0.8.7-1), rust-crossbeam-epoch (= 0.9.20-1), rust-crossbeam-utils (= 0.8.22-1), rust-csv (= 1.4.0-1), rust-csv-core (= 0.1.13-1), rust-defaults (= 1.93.1ubuntu1), rust-either (= 1.17.0-1), rust-fixedbitset (= 0.4.2-1), rust-flate2 (= 1.1.9-2), rust-getrandom (= 0.4.2-3), rust-histogram (= 1.5.0-1), rust-iana-time-zone (= 0.1.64-1), rust-inplace-vec-builder (= 0.1.1-1), rust-itertools (= 0.14.0-2), rust-itoa (= 1.0.18-1), rust-lazy-static (= 1.5.0-3), rust-libc (= 0.2.186-1), rust-liblzma (= 0.4.4-1), rust-liblzma-sys (= 0.4.4-2), rust-libm (= 0.2.16-1), rust-librocksdb-sys (= 0.17.1-2), rust-log (= 0.4.32-1), rust-matrixmultiply (= 0.3.11-1), rust-md5 (= 0.8.0-4), rust-memchr (= 2.8.3-1), rust-memmap2 (= 0.9.11-1), rust-miniz-oxide (= 0.9.1-2), rust-murmurhash3 (= 0.0.5-2), rust-nalgebra (= 0.35.0-2), rust-needletail (= 0.6.3-3), rust-niffler (= 2.6.0-3), rust-nohash-hasher (= 0.2.0-1), rust-num-complex (= 0.4.6-3), rust-num-integer (= 0.1.46-2), rust-num-iter (= 0.1.45-1), rust-num-rational (= 0.4.2-1), rust-num-traits (= 0.2.19-2), rust-once-cell (= 1.21.4-1), rust-ouroboros (= 0.18.5-2), rust-piz (= 0.5.1-4), rust-ppv-lite86 (= 0.2.21-2), rust-primal-check (= 0.3.4-1), rust-rand (= 0.10.2+dfsg-1), rust-rand-0.8 (= 0.8.6+dfsg-1), rust-rand-chacha-0.3 (= 0.3.1-4), rust-rand-core (= 0.10.0-2), rust-rand-core-0.6 (= 0.6.4-5), rust-rand-distr (= 0.6.0-2), rust-rawpointer (= 0.2.1-1), rust-rayon (= 1.11.0-1), rust-rayon-core (= 1.13.0-1), rust-roaring (= 0.11.3-3), rust-rocksdb (= 0.23.0-2), rust-roots (= 0.0.8-2), rust-ryu (= 1.0.22-1), rust-safe-arch (= 1.0.0-2), rust-serde (= 1.0.228-3build1), rust-serde-core (= 1.0.228-2build1), rust-serde-json (= 1.0.150-1), rust-simba (= 0.10.0-2), rust-simd-adler32 (= 0.3.9-1), rust-smallvec (= 1.15.2-1), rust-sorted-iter (= 0.1.11-1), rust-static-assertions (= 1.1.0-1build1), rust-statrs (= 0.18.0-5), rust-streaming-stats (= 0.2.3-1), rust-thiserror (= 2.0.18-1), rust-thiserror-1 (= 1.0.69-1), rust-twox-hash (= 2.1.2-2), rust-typed-builder (= 0.23.2-1), rust-typenum (= 1.20.1-1), rust-vec-collections (= 0.4.3-6), rust-wide (= 1.6.0+ds-1), rust-zerocopy (= 0.8.26-4), rust-zmij (= 1.0.21-1), rust-zstd (= 0.13.3-1), rust-zstd-safe (= 7.2.4-1), rust-zstd-sys (= 2.0.16-1)
Section: python
Priority: optional
Homepage: https://github.com/sourmash-bio/sourmash
Description: tools for comparing DNA sequences with MinHash sketches
 Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
 .
 MinHash sketches provide a lightweight way to store “signatures” of large DNA
 or RNA sequence collections, and then compare or search them using a Jaccard
 index. MinHash sketches can be used to identify samples, find similar samples,
 identify data sets with shared sequences, and build phylogenetic trees
 (Ondov et al. 2015).
 .
 sourmash provides a command line script, a Python library, and a CPython
 module for MinHash sketches.
 .
 These tools provide functionality previously handled by the 'khmer' package.
