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sequence_file/input_options.hpp
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// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: BSD-3-Clause
#pragma once
#include <seqan3/core/platform.hpp>
namespace seqan3
{
template <typename sequence_legal_alphabet>
struct sequence_file_input_options
{
bool truncate_ids = false;
bool embl_genbank_complete_header = false;
bool fasta_ignore_blanks_before_id = true;
};
} // namespace seqan3
seqan3
The main SeqAn3 namespace.
Definition aligned_sequence_concept.hpp:26
platform.hpp
Provides platform and dependency checks.
seqan3::sequence_file_input_options
The options type defines various option members that influence the behaviour of all or some formats.
Definition sequence_file/input_options.hpp:24
seqan3::sequence_file_input_options< typename traits_type::sequence_legal_alphabet >::fasta_ignore_blanks_before_id
bool fasta_ignore_blanks_before_id
Definition sequence_file/input_options.hpp:30
seqan3::sequence_file_input_options< typename traits_type::sequence_legal_alphabet >::embl_genbank_complete_header
bool embl_genbank_complete_header
Definition sequence_file/input_options.hpp:28
seqan3::sequence_file_input_options< typename traits_type::sequence_legal_alphabet >::truncate_ids
bool truncate_ids
Definition sequence_file/input_options.hpp:26
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