Package: seqan-raptor
Version: 3.0.1+ds-12
Architecture: amd64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2407
Depends: libbz2-1.0, libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgomp1 (>= 6), libstdc++6 (>= 14), libyaml-cpp0.8 (>= 0.7.0), zlib1g (>= 1:1.1.4)
Suggests: cwl-runner
Section: science
Priority: optional
Homepage: https://github.com/seqan/raptor
Description: pre-filter for querying very large collections of nucleotide sequences
 Raptor is a system for approximately searching many queries such as
 next-generation sequencing reads or transcripts in large collections of
 nucleotide sequences. Raptor uses winnowing minimizers to define a set of
 representative k-mers, an extension of the interleaved Bloom filters (IBFs) as
 a set membership data structure and probabilistic thresholding for minimizers.
 This approach allows compression and partitioning of the IBF to enable the
 effective use of secondary memory.
