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update_parent_kmers.hpp
Go to the documentation of this file.
// --------------------------------------------------------------------------------------------------
// Copyright (c) 2006-2023, Knut Reinert & Freie Universität Berlin
// Copyright (c) 2016-2023, Knut Reinert & MPI für molekulare Genetik
// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
// shipped with this file and also available at: https://github.com/seqan/raptor/blob/main/LICENSE.md
// --------------------------------------------------------------------------------------------------
#pragma once
#include <robin_hood.h>
#include <raptor/argument_parsing/timer.hpp>
namespace raptor::hibf
{
void update_parent_kmers(robin_hood::unordered_flat_set<size_t> & parent_kmers,
robin_hood::unordered_flat_set<size_t> const & kmers,
timer<concurrent::yes> & merge_kmers_timer);
} // namespace raptor::hibf
raptor::hibf
Must be first include.
Definition bin_size_in_bits.hpp:18
timer.hpp
Provides raptor::timer.