out
out/accessory.header.embl
out/accessory.tab
out/accessory_binary_genes.fa
out/accessory_binary_genes.fa.newick
out/accessory_graph.dot
out/blast_identity_frequency.Rtab
out/clustered_proteins
out/core_accessory.header.embl
out/core_accessory.tab
out/core_accessory_graph.dot
out/gene_presence_absence.Rtab
out/gene_presence_absence.csv
out/number_of_conserved_genes.Rtab
out/number_of_genes_in_pan_genome.Rtab
out/number_of_new_genes.Rtab
out/number_of_unique_genes.Rtab
out/summary_statistics.txt
