REAPR-SEQRENAME(1)

NAME
reapr-seqrename - renames all sequences in a BAM file

SYNOPSIS

reapr seqrename <renamefile> <in.bam> <out.bam>

DESCRIPTION

<renamefile> is the file .info made by facheck, which contains the mapping of old name to new name.

SEE ALSO

reapr(1)