# Package edu.msu.cme.rdp.classifier.train

package edu.msu.cme.rdp.classifier.train

Related Packages
Package
Description
edu.msu.cme.rdp.classifier
edu.msu.cme.rdp.classifier.train.validation
edu.msu.cme.rdp.classifier.cli
edu.msu.cme.rdp.classifier.comparison
edu.msu.cme.rdp.classifier.io
edu.msu.cme.rdp.classifier.rrnaclassifier
edu.msu.cme.rdp.classifier.utils
Class
Description
ClassifierTraineeMaker
A command line class to create training information from the raw data.
CopyNumberParser
LineageSequence
A ParsedRawSequence holds the data for a raw sequence.
LineageSequenceParser
A parser to parse a reader containing the raw sequences.
NameRankDupException
RawGenusWordConditionalProb
A RawGenusWordConditionalProb contains the index of the genus node and the conditional probability of the node contains the word.
RawHierarchyTree
A RawHierarchyTree holds the raw taxon and sequences information.
Taxonomy
A Taxonomy holds the raw taxon information.
TreeFactory
A TreeFactory reads the raw taxonomic information and creates the RawHierarchyTree nodes.