# Serialized Form

## Package edu.msu.cme.rdp.classifier

### Class edu.msu.cme.rdp.classifier.ShortSequenceException extends java.lang.IllegalArgumentException implements Serializable

### Serialized Fields

#### message

    java.lang.String message

#### seqDoc

    java.lang.String seqDoc

### Class edu.msu.cme.rdp.classifier.TrainingDataException extends java.lang.Exception implements Serializable

## Package edu.msu.cme.rdp.classifier.comparison

### Class edu.msu.cme.rdp.classifier.comparison.ComparisonResultTreeSet extends java.util.TreeSet implements Serializable

## Package edu.msu.cme.rdp.classifier.train

### Class edu.msu.cme.rdp.classifier.train.LineageSequence extends edu.msu.cme.rdp.readseq.readers.Sequence implements Serializable

### Serialized Fields

#### ancestors

    java.util.List<E> ancestors

### Class edu.msu.cme.rdp.classifier.train.NameRankDupException extends java.lang.Exception implements Serializable

## Package edu.msu.cme.rdp.classifier.train.validation

### Class edu.msu.cme.rdp.classifier.train.validation.SortedROCSet extends java.util.TreeSet<SortedROCSet.PredictionCount> implements Serializable

## Package edu.msu.cme.rdp.classifier.utils

### Class edu.msu.cme.rdp.classifier.utils.ClassifierSequence extends edu.msu.cme.rdp.readseq.readers.Sequence implements Serializable

### Serialized Fields

#### reverse

    boolean reverse

#### goodWordCount

    java.lang.Integer goodWordCount

#### wordIndexArr

    int[] wordIndexArr