Package: ragout
Version: 2.3-6
Architecture: amd64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 9621
Depends: python3-networkx, python3:any, libc6 (>= 2.38), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 14)
Recommends: sibelia
Section: science
Priority: optional
Homepage: https://github.com/fenderglass/Ragout/
Description: Reference-Assisted Genome Ordering UTility
 Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
 chromosome-level scaffolding using multiple references. Given initial
 assembly fragments (contigs/scaffolds) and one or multiple related
 references (complete or draft), it produces a chromosome-scale assembly
 (as a set of scaffolds).
 .
 The approach is based on the analysis of genome rearrangements (like
 inversions or chromosomal translocations) between the input genomes and
 reconstructing the most parsimonious structure of the target genome.
 .
 Ragout now supports both small and large genomes (of mammalian scale
 and complexity). The assembly of highly polymorphic genomes is
 currently limited.
