# Supporting Functions for Packages Maintained by 'YuLab-SMU'

## Documentation for package ‘yulab.utils’ version 0.2.4

- DESCRIPTION file.
- Package NEWS.

## Help Pages

auto_set_regexpr_style | Switch regular expression style (PCRE vs TRE)
Biocpkg | Markdown link to CRAN/Bioconductor
c2 | c2
cache_list_items | Cache intermediate data
cache_load | Cache intermediate data
cache_save | Cache intermediate data
cache_size | Cache intermediate data
check_directory | Check if directory exists and is accessible
check_file | Handle file operations with proper error messages
check_input | Validate input with type/length constraints
check_packages | Check if required packages are installed with informative errors
check_pkg | Check if required packages are installed with informative errors
check_range | Check if value is within specified range
combinations | combinations
CRANpkg | Markdown link to CRAN/Bioconductor
download_yulab_file | Process YuLab File Download
exec | exec
get_cache | Cache intermediate data
get_cache_element | Cache intermediate data
get_cache_item | Cache intermediate data
get_dependencies | get_dependencies
get_fun_from_pkg | get_fun_from_pkg
Githubpkg | Markdown link to GitHub
has_internet | has_internet
initial_cache | Cache intermediate data
initial_cache_item | Cache intermediate data
install_zip | install_zip
install_zip_gh | install_zip_gh
is.installed | is.installed
load_OrgDb | load_OrgDb
ls2df | Convert a list of vectors (e.g., gene IDs) to 'data.frame'
mat2df | mat2df
mat2list | mat2list
mypkg | mypkg
o | o
packageTitle | packageTitle
parse_ratio | parse_ratio
pload | pload
prune_cache_item | Cache intermediate data
quiet | quiet
rbindlist | rbindlist
read.cb | read.cb
rm_cache | Cache intermediate data
rm_cache_item | Cache intermediate data
scale_range | scale-range
scihub_dl | download publication via scihub
set_PCRE | Switch regular expression style (PCRE vs TRE)
set_regexpr_style | Switch regular expression style (PCRE vs TRE)
set_TRE | Switch regular expression style (PCRE vs TRE)
show_in_excel | show_in_excel
str_detect | str_detect
str_ends | str_starts
str_extract | str_extract
str_starts | str_starts
str_wrap | str_wrap
update_cache_item | Cache intermediate data
user_dir | user_dir
use_perl | Switch regular expression style (PCRE vs TRE)
with_cache | Cache intermediate data
yread | yread
yread_tsv | yread
yulab_abort | Standardized error handling
yulab_inform | Standardized error handling
yulab_msg | yulab_msg
yulab_warn | Standardized error handling