Package: r-cran-sctransform
Version: 0.4.3-1
Architecture: arm64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 755
Depends: r-api-4.0, r-cran-dplyr, r-cran-magrittr, r-cran-mass, r-cran-matrix (>= 1.5-0), r-cran-future.apply, r-cran-future, r-cran-parallelly, r-cran-ggplot2, r-cran-reshape2, r-cran-rlang, r-cran-gridextra, r-cran-matrixstats, r-cran-rcpparmadillo, r-cran-rcpp (>= 0.11.0), libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.0), liblapack3 | liblapack.so.3, libstdc++6 (>= 14)
Recommends: r-cran-irlba, r-cran-testthat, r-cran-knitr
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=sctransform
Description: Variance Stabilizing Transformations for Single Cell UMI Data
 A normalization method for single-cell UMI count data using
 a variance stabilizing transformation. The transformation is based
 on a negative binomial regression model with regularized parameters.
 As part of the same regression framework, this package also provides functions
 for batch correction, and data correction. See Hafemeister and Satija
 (2019) <doi:10.1186/s13059-019-1874-1>, and Choudhary and Satija (2022)
 <doi:10.1186/s13059-021-02584-9> for more details.
