# Support Functions and Data for "Ecological Models and Data"

## Documentation for package ‘emdbook’ version 1.3.13

- DESCRIPTION file.
- Package NEWS.

## Help Pages

emdbook-package | Support Functions and Data for "Ecological Models and Data"
apply2d | Apply a function to a combination of vectors
as.mcmc.bugs | Convert WinBUGS output to CODA format
axis.scinot | Scientific notation as LaTeX/expression()
BetaBinomial | Beta-binomial distribution
calcslice | Negative log-likelihood slice
contour3d | Superimpose contour lines on a 3D plot
curve3d | Plot a 3D surface representing a 2D curve
Damselfish | Reef fish (damselfish) data
DamselRecruitment | Reef fish (damselfish) data
DamselRecruitment_sum | Reef fish (damselfish) data
DamselSettlement | Reef fish (damselfish) data
dbetabinom | Beta-binomial distribution
dchibarsq | Mixed chi-squared distributions
deltamethod | Delta method functions
deltavar | Delta method functions
dmvnorm | Multivariate normal distribution density function
dzinbinom | Zero-inflated negative binomial distribution
emdbook | Support Functions and Data for "Ecological Models and Data"
Fir | Data on fir (Abies) life history
FirDBHFec | Data on fir (Abies) life history
FirDBHFec_sum | Data on fir (Abies) life history
get.emdbook.packages | install and update auxiliary packages
GobySurvival | Goby (reef fish) survivorship data
gridsearch2d | Graphical grid search in 2D
HPDregionplot | Plot highest posterior density region
lambertW | Lambert W function
lambertW_base | Lambert W function
Lily | Glacier lily occurrence and fecundity data
Lily_sum | Glacier lily occurrence and fecundity data
lseq | Log-spaced sequence
lump.mcmc.list | Utility functions for mcmc objects
lWasymp | Lambert W function
metropSB | Metropolis-Szymura-Barton algorithm
Myxo | Myxomatosis titer data
MyxoTiter_sum | Myxomatosis titer data
ncredint | Calculate Bayesian credible intervals
pchibarsq | Mixed chi-squared distributions
perturb.params | Create a list of perturbed parameters
qchibarsq | Mixed chi-squared distributions
rbetabinom | Beta-binomial distribution
rchibarsq | Mixed chi-squared distributions
Reedfrog | Data on reed frog predation experiments
ReedfrogFuncresp | Data on reed frog predation experiments
ReedfrogPred | Data on reed frog predation experiments
ReedfrogSizepred | Data on reed frog predation experiments
rzinbinom | Zero-inflated negative binomial distribution
scinot | Scientific notation as LaTeX/expression()
SeedPred | Seed predation data set from Duncan and Duncan 2000
SeedPred_mass | Seed predation data set from Duncan and Duncan 2000
SeedPred_wide | Seed predation data set from Duncan and Duncan 2000
tcredint | Calculate Bayesian credible intervals
traceplot.mcmc | Deprecated (obsolete) functions
trcoef | Transform coefficients
update.bmb.packages | install and update auxiliary packages