# Vignettes and other documentation

## Vignettes from package 'TCGAbiolinks'

TCGAbiolinks::analysis |  | 7. Analyzing and visualizing TCGA data | HTML | source | R code
TCGAbiolinks::casestudy |  | 8. Case Studies | HTML | source | R code
TCGAbiolinks::classifiers |  | 10. Classifiers | HTML | source | R code
TCGAbiolinks::clinical |  | "4. Clinical data" | HTML | source | R code
TCGAbiolinks::download_prepare |  | "3. Downloading and preparing files for analysis" | HTML | source | R code
TCGAbiolinks::extension |  | "10. TCGAbiolinks_Extension" | HTML | source | R code
TCGAbiolinks::index |  | "1. Introduction" | HTML | source | R code
TCGAbiolinks::mutation |  | "5. Mutation data" | HTML | source | R code
TCGAbiolinks::query |  | "2. Searching GDC database" | HTML | source | R code
TCGAbiolinks::stemness_score |  | 11. Stemness score | HTML | source | R code
TCGAbiolinks::subtypes |  | 6. Compilation of TCGA molecular subtypes | HTML | source | R code