# Sequence logos for DNA sequence alignments

## Documentation for package ‘seqLogo’ version 1.72.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

alphabet | An S4 class to represent a PWM matrix.
consensus | An S4 class to represent a PWM matrix.
consensus-method | An S4 class to represent a PWM matrix.
ic | An S4 class to represent a PWM matrix.
ic-method | An S4 class to represent a PWM matrix.
makePWM | Constructing a pwm object
plot-method | An S4 class to represent a PWM matrix.
pwm | An S4 class to represent a PWM matrix.
pwm-class | An S4 class to represent a PWM matrix.
pwm-method | An S4 class to represent a PWM matrix.
seqLogo | Plot a sequence logo for a given position weight matrix
show-method | An S4 class to represent a PWM matrix.
summary-method | An S4 class to represent a PWM matrix.