# A simple S4 class for storing basic information about a collection of genomic sequences

## Documentation for package ‘Seqinfo’ version 1.2.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

as.data.frame-method | Seqinfo objects
as.data.frame.Seqinfo | Seqinfo objects
bsgenomeName | GenomeDescription objects
bsgenomeName-method | GenomeDescription objects
checkCompatibleSeqinfo | Seqinfo objects
class:GenomeDescription | GenomeDescription objects
class:Seqinfo | Seqinfo objects
coerce-method | Seqinfo objects
commonName | GenomeDescription objects
commonName-method | GenomeDescription objects
genome | Accessing/modifying sequence information
genome-method | Seqinfo objects
genome-method | Accessing/modifying sequence information
genome<- | Accessing/modifying sequence information
genome<--method | Seqinfo objects
genome<--method | Accessing/modifying sequence information
GenomeDescription | GenomeDescription objects
GenomeDescription-class | GenomeDescription objects
intersect-method | Seqinfo objects
isCircular | Accessing/modifying sequence information
isCircular-method | Seqinfo objects
isCircular-method | Accessing/modifying sequence information
isCircular<- | Accessing/modifying sequence information
isCircular<--method | Seqinfo objects
isCircular<--method | Accessing/modifying sequence information
length-method | Seqinfo objects
merge-method | Seqinfo objects
merge.Seqinfo | Seqinfo objects
names-method | Seqinfo objects
names<--method | Seqinfo objects
orderSeqlevels | Assign sequence IDs to sequence names
organism | GenomeDescription objects
organism-method | GenomeDescription objects
provider | GenomeDescription objects
provider-method | GenomeDescription objects
providerVersion | GenomeDescription objects
providerVersion-method | GenomeDescription objects
rankSeqlevels | Assign sequence IDs to sequence names
releaseDate | GenomeDescription objects
releaseDate-method | GenomeDescription objects
restoreSeqlevels | Accessing/modifying sequence information
Seqinfo | Seqinfo objects
seqinfo | Accessing/modifying sequence information
Seqinfo-class | Seqinfo objects
seqinfo-method | GenomeDescription objects
seqinfo<- | Accessing/modifying sequence information
seqlengths | Accessing/modifying sequence information
seqlengths-method | Seqinfo objects
seqlengths-method | Accessing/modifying sequence information
seqlengths<- | Accessing/modifying sequence information
seqlengths<--method | Seqinfo objects
seqlengths<--method | Accessing/modifying sequence information
seqlevels | Accessing/modifying sequence information
seqlevels-method | Seqinfo objects
seqlevels-method | Accessing/modifying sequence information
seqlevels0 | Accessing/modifying sequence information
seqlevels<- | Accessing/modifying sequence information
seqlevels<--method | Seqinfo objects
seqlevels<--method | Accessing/modifying sequence information
seqlevelsInUse | Get the sequence levels in use
seqlevelsInUse-method | Get the sequence levels in use
seqnames | Accessing/modifying sequence information
seqnames-method | GenomeDescription objects
seqnames-method | Seqinfo objects
seqnames<- | Accessing/modifying sequence information
seqnames<--method | Seqinfo objects
show-method | GenomeDescription objects
show-method | Seqinfo objects
sortSeqlevels | Sort the sequence levels of an object
sortSeqlevels-method | Sort the sequence levels of an object
species | GenomeDescription objects
species-method | GenomeDescription objects
summary-method | Seqinfo objects
summary.Seqinfo | Seqinfo objects
update-method | Seqinfo objects
update.Seqinfo | Seqinfo objects
updateObject-method | Seqinfo objects
[-method | Seqinfo objects