Package: r-bioc-pfamanalyzer
Version: 1.12.0+dfsg-1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 77
Depends: r-api-4.0, r-api-bioc-3.23, r-cran-readr, r-cran-stringr, r-cran-dplyr, r-cran-tibble, r-cran-magrittr, r-pkg-team-core-architecture
Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/pfamAnalyzeR/
Description: Identification of domain isotypes in pfam data
 Protein domains is one of the most import annoation of proteins we have
 with the Pfam database/tool being (by far) the most used tool. This R
 package enables the user to read the pfam prediction from both webserver
 and stand-alone runs into R. We have recently shown most human protein domains
 exist as multiple distinct variants termed domain isotypes. Different domain
 isotypes are used in a cell, tissue, and disease-specific manner.
 Accordingly, we find that domain isotypes, compared to each other, modulate,
 or abolish the functionality of a protein domain. This R package enables
 the identification and classification of such domain isotypes from Pfam data.
