Package: r-bioc-multtest
Version: 2.68.0-1
Architecture: amd64
Architecture-Variant: amd64v3
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 1064
Depends: r-api-4.0, r-api-bioc-3.23, r-bioc-biocgenerics, r-bioc-biobase, r-cran-survival, r-cran-mass, libc6 (>= 2.38), r-pkg-team-core-architecture
Suggests: r-cran-snow
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/multtest/
Description: Resampling-based multiple hypothesis testing
 Non-parametric bootstrap and permutation resampling-based multiple
 testing procedures (including empirical Bayes methods) for controlling
 the family-wise error rate (FWER), generalized family-wise error rate (gFWER),
 tail probability of the proportion of false positives (TPPFP), and false
 discovery rate (FDR). Several choices of bootstrap-based null distribution
 are implemented (centered, centered and scaled, quantile-transformed).
 Single-step and step-wise methods are available. Tests based on a variety
 of t- and F-statistics (including t-statistics based on regression
 parameters from linear and survival models as well as those based
 on correlation parameters) are included. When probing hypotheses with
 t-statistics, users may also select a potentially faster null distribution
 which is multivariate normal with mean zero and variance covariance matrix
 derived from the vector influence function. Results are reported in terms
 of adjusted p-values, confidence regions and test statistic cutoffs.
 The procedures are directly applicable to identifying differentially expressed
 genes in DNA microarray experiments.
