Package: r-bioc-genomicfeatures
Version: 1.38.2+dfsg-1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 4358
Depends: r-base-core (>= 3.6.2-2build1), r-api-3.5, r-api-bioc-3.10, r-bioc-biocgenerics (>= 0.1.0), r-bioc-s4vectors (>= 0.17.29), r-bioc-iranges (>= 2.13.23), r-bioc-genomeinfodb (>= 1.15.4), r-bioc-genomicranges (>= 1.31.17), r-bioc-annotationdbi (>= 1.41.4), r-cran-dbi, r-cran-rsqlite (>= 2.0), r-cran-rcurl, r-bioc-xvector (>= 0.19.7), r-bioc-biostrings (>= 2.47.6), r-bioc-rtracklayer (>= 1.39.7), r-bioc-biomart (>= 2.17.1), r-bioc-biobase (>= 2.15.1)
Suggests: r-bioc-org.hs.eg.db, r-bioc-bsgenome, r-bioc-rsamtools, r-bioc-genomicalignments (>= 1.15.7), r-bioc-ensembldb, r-cran-runit, r-cran-knitr
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/GenomicFeatures/
Description: GNU R tools for making and manipulating transcript centric annotations
 A set of tools and methods for making and manipulating transcript
 centric annotations. With these tools the user can easily download the
 genomic locations of the transcripts, exons and cds of a given organism,
 from either the UCSC Genome Browser or a BioMart database (more sources
 will be supported in the future). This information is then stored in a
 local database that keeps track of the relationship between transcripts,
 exons, cds and genes. Flexible methods are provided for extracting the
 desired features in a convenient format.
