Package: r-bioc-fishpond
Version: 2.18.0+ds-1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 505
Depends: r-api-4.0, r-api-bioc-3.23, r-cran-abind, r-cran-gtools, r-bioc-qvalue, r-bioc-s4vectors, r-bioc-iranges, r-bioc-summarizedexperiment, r-bioc-genomicranges, r-cran-matrixstats, r-cran-svmisc, r-cran-matrix, r-bioc-singlecellexperiment, r-cran-jsonlite, r-pkg-team-core-architecture
Suggests: r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-bioc-tximeta, r-bioc-org.hs.eg.db, r-cran-samr, r-bioc-deseq2, r-bioc-tximportdata, r-bioc-limma, r-bioc-ensembldb, r-bioc-genomicfeatures, r-bioc-annotationdbi, r-cran-pheatmap, r-bioc-gviz, r-bioc-genomeinfodb, r-cran-data.table
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/fishpond/
Description: Differential transcript and gene expression with inferential replicates
 Fishpond contains methods for differential transcript
 and gene expression analysis of RNA-seq data using inferential
 replicates for uncertainty of abundance quantification,
 as generated by Gibbs sampling or bootstrap sampling. Also the
 package contains utilities for working with Salmon and Alevin
 quantification files.
