
skbio.sequence.RNA
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.. currentmodule:: skbio.sequence

.. autoclass:: RNA




   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~RNA.complement_map
      ~RNA.default_gap_char
      ~RNA.definite_chars
      ~RNA.degenerate_map
      ~RNA.gap_chars
      ~RNA.wildcard_char
   

   
   .. rubric:: Attributes (inherited)

   .. autoinherit::
   
      ~RNA.alphabet
      ~RNA.default_write_format
      ~RNA.degenerate_chars
      ~RNA.interval_metadata
      ~RNA.metadata
      ~RNA.noncanonical_chars
      ~RNA.nondegenerate_chars
      ~RNA.observed_chars
      ~RNA.positional_metadata
      ~RNA.values
   
   

   
   
   .. rubric:: Methods

   .. autosummary::
      :toctree:
   
      ~RNA.find_motifs
   
      ~RNA.read
   
      ~RNA.reverse_transcribe
   
      ~RNA.translate
   
      ~RNA.translate_six_frames
   
      ~RNA.write
   
   

   
   .. rubric:: Methods (inherited)

   .. autoinherit::
      ~RNA.complement
      ~RNA.concat
      ~RNA.count
      ~RNA.definites
      ~RNA.degap
      ~RNA.degenerates
      ~RNA.distance
      ~RNA.expand_degenerates
      ~RNA.find_with_regex
      ~RNA.frequencies
      ~RNA.gaps
      ~RNA.gc_content
      ~RNA.gc_frequency
      ~RNA.has_definites
      ~RNA.has_degenerates
      ~RNA.has_gaps
      ~RNA.has_interval_metadata
      ~RNA.has_metadata
      ~RNA.has_nondegenerates
      ~RNA.has_positional_metadata
      ~RNA.index
      ~RNA.is_reverse_complement
      ~RNA.iter_contiguous
      ~RNA.iter_kmers
      ~RNA.kmer_frequencies
      ~RNA.lowercase
      ~RNA.match_frequency
      ~RNA.matches
      ~RNA.mismatch_frequency
      ~RNA.mismatches
      ~RNA.nondegenerates
      ~RNA.replace
      ~RNA.reverse_complement
      ~RNA.to_definites
      ~RNA.to_indices
      ~RNA.to_regex
   
   

   
   

   
   .. rubric:: Special methods (inherited)

   .. autoinherit::
   
      ~RNA.__bool__
      ~RNA.__contains__
      ~RNA.__copy__
      ~RNA.__deepcopy__
      ~RNA.__eq__
      ~RNA.__ge__
      ~RNA.__getitem__
      ~RNA.__getstate__
      ~RNA.__gt__
      ~RNA.__iter__
      ~RNA.__le__
      ~RNA.__len__
      ~RNA.__lt__
      ~RNA.__ne__
      ~RNA.__reversed__
      ~RNA.__str__
   
   




   
   .. rubric:: Details

   
   
   .. autoattribute:: RNA.complement_map
   
   
   
   .. autoattribute:: RNA.default_gap_char
   
   
   
   .. autoattribute:: RNA.definite_chars
   
   
   
   .. autoattribute:: RNA.degenerate_map
   
   
   
   .. autoattribute:: RNA.gap_chars
   
   
   
   .. autoattribute:: RNA.wildcard_char
   
   

   
   