
skbio.alignment.AlignPath
=========================







   

   

   
      
   

   

   
      
   

   

   
      
   

   
      
   

   
      
   

   

   

   
      
   

   
      
   

   
      
   

   

   

   

   

   

   

   
      
   

   

   

   

   

   

   

   

   








   
      
   

   
      
   

   
      
   

   
      
   





   

   
      
         
      
   

   
      
         
      
   

   
      
         
      
   

   
      
         
      
   

   
      
         
      
   

   
      
         
      
   

   
      
         
      
   





   
      
   

   
      
   

   
      
   

   
      
   

   
      
   

   
      
   

   
      
   

   
      
   

   
      
   





.. currentmodule:: skbio.alignment

.. autoclass:: AlignPath




   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~AlignPath.lengths
      ~AlignPath.shape
      ~AlignPath.starts
      ~AlignPath.states
   

   
   

   
   
   .. rubric:: Methods

   .. autosummary::
      :toctree:
   
      ~AlignPath.from_bits
   
      ~AlignPath.from_coordinates
   
      ~AlignPath.from_indices
   
      ~AlignPath.from_tabular
   
      ~AlignPath.to_bits
   
      ~AlignPath.to_coordinates
   
      ~AlignPath.to_indices
   
   

   
   

   
   
   .. rubric:: Special methods

   .. autosummary::
   
      ~AlignPath.__str__
   

   
   .. rubric:: Special methods (inherited)

   .. autoinherit::
   
      ~AlignPath.__eq__
      ~AlignPath.__ge__
      ~AlignPath.__getstate__
      ~AlignPath.__gt__
      ~AlignPath.__hash__
      ~AlignPath.__le__
      ~AlignPath.__lt__
      ~AlignPath.__ne__
   
   




   
   .. rubric:: Details

   
   
   .. autoattribute:: AlignPath.lengths
   
   
   
   .. autoattribute:: AlignPath.shape
   
   
   
   .. autoattribute:: AlignPath.starts
   
   
   
   .. autoattribute:: AlignPath.states
   
   

   
   
   .. automethod:: AlignPath.__str__
   
   
   