
skbio.alignment.PairAlignPath
=============================




   

   

   
      
   

   

   
      
   

   

   
      
   

   
      
   

   
      
   

   

   

   
      
   

   
      
   

   
      
   

   

   

   

   

   

   

   
      
   

   

   

   

   

   

   

   

   

   

   


.. currentmodule:: skbio.alignment

.. autoclass:: PairAlignPath

   
   .. rubric:: Attributes

   .. autosummary::
   
      ~PairAlignPath.lengths
      ~PairAlignPath.shape
      ~PairAlignPath.starts
      ~PairAlignPath.states
   

   
   .. rubric:: Built-ins

   .. autosummary::
      :toctree:
   
      ~PairAlignPath.__eq__
      ~PairAlignPath.__ge__
      ~PairAlignPath.__getstate__
      ~PairAlignPath.__gt__
      ~PairAlignPath.__hash__
      ~PairAlignPath.__le__
      ~PairAlignPath.__lt__
      ~PairAlignPath.__ne__
      ~PairAlignPath.__str__
   

   
   .. rubric:: Methods

   .. autosummary::
      :toctree:
   
      
      
      ~PairAlignPath.from_bits
      
      
      ~PairAlignPath.from_cigar
      
      
      ~PairAlignPath.from_coordinates
      
      
      ~PairAlignPath.from_indices
      
      
      ~PairAlignPath.from_tabular
      
      
      ~PairAlignPath.to_bits
      
      
      ~PairAlignPath.to_cigar
      
      
      ~PairAlignPath.to_coordinates
      
      
      ~PairAlignPath.to_indices
      
   