skbio.alignment.AlignmentStructure
==================================

.. currentmodule:: skbio.alignment

.. autoclass:: AlignmentStructure

   

   .. HACK -- the point here is that we don't want this to appear in the output, but the autosummary should still generate the pages.
      .. autosummary::
         :toctree:
      
         
         AlignmentStructure.__format__
         
         
         
         
         
         
         
         
         AlignmentStructure.is_zero_based
         
         AlignmentStructure.set_zero_based



   

   .. HACK -- the point here is that we don't want this to appear in the output, but the autosummary should still generate the pages.
      .. autosummary::
         :toctree:
      
         AlignmentStructure.aligned_query_sequence
         AlignmentStructure.aligned_target_sequence
         AlignmentStructure.cigar
         AlignmentStructure.optimal_alignment_score
         AlignmentStructure.query_begin
         AlignmentStructure.query_end
         AlignmentStructure.query_sequence
         AlignmentStructure.suboptimal_alignment_score
         AlignmentStructure.target_begin
         AlignmentStructure.target_end_optimal
         AlignmentStructure.target_end_suboptimal
         AlignmentStructure.target_sequence

