# screed - short read sequence utils

Copyright:

  2008, Michigan State University.

Copyright:

  2015, The Regents of the University of California.

Authors:

  Alex Nolley, C. Titus Brown

Contact:

  ctb@msu.edu

License:

  BSD

Contents:

- User Manual
  - Installation
  - Command-line Quick Start
  - Python Quick Start
  - File Formats As Understood By Screed
  - FASTA <-> FASTQ Conversion
- screed examples
  - Basic Usage
- The screed developer documentation
  - Writing Custom Sequence Parsers
  - Coding guidelines and code review checklist
  - Release Documentation
- Release notes for past versions of screed
  - Release v0.5
  - Release v0.8
- Known Issues
  - List of known issues
- Contributor Code of Conduct
- License

# Indices and tables

- Index

- Module Index

- Search Page