python-pysam (0.15.4+ds-1build1) focal; urgency=medium

  * No-change rebuild to drop python3.7.

 -- Matthias Klose <doko@ubuntu.com>  Tue, 18 Feb 2020 10:23:54 +0100

python-pysam (0.15.4+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * python-pysam-tests: Multi-Arch: foreign
  * Try to keep example_no_seq_in_header_null_bytes.bam from being deleted

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Thu, 23 Jan 2020 15:00:17 +0100

python-pysam (0.15.3+ds-5) unstable; urgency=medium

  [ Chris Lamb ]
  * make the build reproducible
    Closes: #948280

  [ Andreas Tille ]
  * Standards-Version: 4.4.1
  * debian/copyright: use spaces rather than tabs to start continuation
    lines.
  * Set upstream metadata fields: Bug-Database, Repository, Repository-
    Browse.

 -- Andreas Tille <tille@debian.org>  Mon, 06 Jan 2020 17:44:23 +0100

python-pysam (0.15.3+ds-4) unstable; urgency=medium

  * Team upload.
  * Replace missing hts_seek and hts_tell equivalents

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sun, 05 Jan 2020 21:23:11 +0100

python-pysam (0.15.3+ds-3) unstable; urgency=medium

  * Team upload.
  * -docs: oops, don't try to ship nonexistent debian/tests/run-nose{3,}-tests

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sun, 05 Jan 2020 08:01:33 +0100

python-pysam (0.15.3+ds-2) unstable; urgency=medium

  * Team upload.
  * new patch: Update deprecated samtools import test commands to samtools view
  * new patch: Update samtools + bcftools to v1.10
  * disable tests for now

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sat, 04 Jan 2020 23:19:04 +0100

python-pysam (0.15.3+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream release. Not yet dropping py2 due to paleomix and pbsuite
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * Trim trailing whitespace.
  * Use secure URI in Homepage field.
  * Set upstream metadata fields: Repository.
  * New patch to remove symbols that were dropped in htslib 1.10:
    hts_utell, hts_useek (Closes: #947426)

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Fri, 03 Jan 2020 21:25:33 +0100

python-pysam (0.15.2+ds-2) unstable; urgency=medium

  * Team upload.
  * For the Tabix tests: test the index contents, not the compression scheme.
    Closes: #919928, #920250

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Wed, 20 Feb 2019 02:45:47 -0800

python-pysam (0.15.2+ds-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.3.0, no changes needed
  * added Py2 and Py3 versions of ${python:Provides}
  * Fix lintian found spelling typos.
  * debian/tests/control.autodep8 → debian/tests/control.
  * remove errant log.txt from the packages.

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Thu, 17 Jan 2019 01:25:11 -0800

python-pysam (0.15.1+ds-1) unstable; urgency=medium

  * Team upload.

  * New upstream version.
    - Removes autogenerated config.h - [many thanks!]
      https://github.com/pysam-developers/pysam/issues/714
    - Explicit compatibility with Python 3.7
  * Removed patch skipping test that complained on missing file

 -- Steffen Moeller <moeller@debian.org>  Fri, 14 Sep 2018 10:44:51 +0200

# For older changelog entries, run 'apt-get changelog python-pysam-tests'
