Package: python-pyfaidx-examples
Source: python-pyfaidx
Version: 0.4.5.2-1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 37
Suggests: python3-pyfaidx | python-pyfaidx
Section: python
Priority: optional
Homepage: https://github.com/mdshw5/pyfaidx
Description: example data for efficient random access to fasta subsequences for Python
 Samtools provides a function "faidx" (FAsta InDeX), which creates a
 small flat index file ".fai" allowing for fast random access to any
 subsequence in the indexed FASTA file, while loading a minimal amount of
 the file in to memory. This Python module implements pure Python classes
 for indexing, retrieval, and in-place modification of FASTA files using
 a samtools compatible index. The pyfaidx module is API compatible with
 the pygr seqdb module. A command-line script "faidx" is installed
 alongside the pyfaidx module, and facilitates complex manipulation of
 FASTA files without any programming knowledge.
 .
 This package provides example data to test the Python modules.
