# Bio.AlignIO.ClustalIO module

Bio.AlignIO support for “clustal” output from CLUSTAL W and other tools.

You are expected to use this module via the Bio.AlignIO functions (or the Bio.SeqIO functions if you want to work directly with the gapped sequences).

class Bio.AlignIO.ClustalIO.ClustalWriter(handle)

  Bases: `SequentialAlignmentWriter`

  Clustalw alignment writer.

  write_alignment(alignment)

    Use this to write (another) single alignment to an open file.

  __firstlineno__ = 20
  __static_attributes__ = ()

class Bio.AlignIO.ClustalIO.ClustalIterator(handle, seq_count=None)

  Bases: `AlignmentIterator`

  Clustalw alignment iterator.

  __next__()

    Parse the next alignment from the handle.

  __firstlineno__ = 93
  __static_attributes__ = ('_header',)

Biopython v: 1.85

Versions
  Previous
  Latest
  Develop

Biopython Project
  Homepage
  On GitHub