\begin{Verbatim}[commandchars=\\\{\}]
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{alignment} \PYG{o}{=} \PYG{n}{alignments}\PYG{p}{[}\PYG{l+m+mi}{1}\PYG{p}{]}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n+nb}{print}\PYG{p}{(}\PYG{n}{alignment}\PYG{p}{)}
\PYG{g+go}{GAACT}
\PYG{g+go}{|\PYGZhy{}|\PYGZhy{}|}
\PYG{g+go}{G\PYGZhy{}A\PYGZhy{}T}
\PYG{g+go}{\PYGZlt{}BLANKLINE\PYGZgt{}}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{alignment}\PYG{o}{.}\PYG{n}{aligned}
\PYG{g+go}{(((0, 1), (2, 3), (4, 5)), ((0, 1), (1, 2), (2, 3)))}
\end{Verbatim}
