python-biopython (1.79+dfsg-3) unstable; urgency=medium

  [ Peter Michael Green ]
  * Restrict architecture list of muscle build-dependency to reflect
    architectures where the current version of muscle is available.
    (Closes: #1006667)

  [ Étienne Mollier ]
  * d/control,d/python3-biopython.links: move from w3-dtd-mathml to slightly
    more recent w3c-sgml-lib.
    Thanks to Peter Green and Vincent Lefevre.
  * Remove d/python3-biopython.lintian-overrides; not in use anymore.

 -- Étienne Mollier <emollier@debian.org>  Sat, 05 Mar 2022 15:36:12 +0100

python-biopython (1.79+dfsg-2) unstable; urgency=medium

  * Move w3-dtd-mathml from Suggests to Depends to avoid dangling symlink
    mathml2.dtd

 -- Andreas Tille <tille@debian.org>  Thu, 17 Feb 2022 20:15:09 +0100

python-biopython (1.79+dfsg-1) unstable; urgency=medium

  * Migrate from Experimental to Unstable.
  * Mark spelling.patch as not needing forward.
    It seems that the file being package might not exists in upcoming
    Biopython versions anymore.
  * adjust-test_GraphicsBitmaps.patch: forwarded upstream.
  * d/control: breaks ncbi-acc-download (<< 0.2.7-2~)

 -- Étienne Mollier <emollier@debian.org>  Fri, 22 Oct 2021 18:10:48 +0200

python-biopython (1.79+dfsg-1~0exp0) experimental; urgency=medium

  * New upstream version
  * d/copyright: update years per LICENSE file.
  * Refresh patches:
    + mkdssp4.patch:
      - renamed from mkdssp4.path, fixing typo in the file extension,
      - skip failing test_PDB_DSSP due to mkdssp 4 too recent,
      - updated patch author's email address;
    + following renderpm upgrade, add adjust-test_GraphicsBitmaps.patch to
      properly skip again the test failing due to missing font;
    + add spelling.patch to fix new spelling-error-in-binary caught by lintian.

 -- Étienne Mollier <emollier@debian.org>  Sat, 16 Oct 2021 12:30:51 +0200

python-biopython (1.78+dfsg-6) unstable; urgency=medium

  * d/control: bump python3-renderpm to python3-biopython dependency.
    (Closes: #995689)

 -- Étienne Mollier <emollier@debian.org>  Mon, 11 Oct 2021 22:25:02 +0200

python-biopython (1.78+dfsg-5) unstable; urgency=medium

  * d/control: update uploader address
  * d/watch: fix broken url to github
  * d{,/tests}/control: add full_suite autopkgtest (Closes: #986410)
  * Standards-Version: 4.6.0 (routine-update)
  * Use secure URI in Homepage field.

 -- Étienne Mollier <emollier@debian.org>  Sun, 22 Aug 2021 21:56:28 +0200

python-biopython (1.78+dfsg-4) unstable; urgency=medium

  * Add mkdssp4.patch. (Closes: #976542)
  * Standards-Version: 4.5.1 (routine-update)
  * Bump dependency on dssp version 4.0.0.

 -- Étienne Mollier <etienne.mollier@mailoo.org>  Sat, 05 Dec 2020 23:32:40 +0100

python-biopython (1.78+dfsg-3) unstable; urgency=medium

  * Bumped ncbi-blast+ version requirement to 2.10.1-3
  * Made sure run-unit-test did not attempt memory allocation override
  * debian/not-installed made more generic for various python versions
    (Closes: #972381)

 -- Étienne Mollier <etienne.mollier@mailoo.org>  Sat, 17 Oct 2020 13:59:04 +0200

python-biopython (1.78+dfsg-2) unstable; urgency=medium

  * Bumped build requirement on ncbi-blast+ 2.10.1-2 and greater:
      - fixed building on mipsel;
      - removed patch working around makeblastdb bug in v5, now unnecessary.
  * Cleaned up patches:
      - added DEP3 description to blastdbv4-tests-filter-archs.patch;
      - reviewed and forwarded patches upstream when applicable.

 -- Étienne Mollier <etienne.mollier@mailoo.org>  Fri, 02 Oct 2020 23:18:07 +0200

python-biopython (1.78+dfsg-1) unstable; urgency=medium

  * Bumped build requirement on ncbi-blast+ 2.10.0-3 and greater,
  * Reworked the patch working around makeblastd bug in v5 to fall back in v4
    only on architectures on which corrections are yet to be implemented.
  * Removed patches applied upstream.
  * New upstream version
  * debhelper-compat 13 (routine-update)
  * Improved build reproducibility

 -- Étienne Mollier <etienne.mollier@mailoo.org>  Wed, 09 Sep 2020 22:53:13 +0200

# For older changelog entries, run 'apt-get changelog python-biopython-doc'
