\begin{Verbatim}[commandchars=\\\{\}]
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{k+kn}{from} \PYG{n+nn}{Bio} \PYG{k+kn}{import} \PYG{n}{AlignIO}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{align} \PYG{o}{=} \PYG{n}{AlignIO}\PYG{o}{.}\PYG{n}{read}\PYG{p}{(}\PYG{n}{child}\PYG{o}{.}\PYG{n}{stdout}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}clustal\PYGZdq{}}\PYG{p}{)}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{k}{print}\PYG{p}{(}\PYG{n}{align}\PYG{p}{)}
\PYG{g+go}{SingleLetterAlphabet() alignment with 6 rows and 900 columns}
\PYG{g+go}{TATACATTAAAGGAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273290|gb|AF191664.1|AF19166}
\PYG{g+go}{TATACATTAAAGGAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273289|gb|AF191663.1|AF19166}
\PYG{g+go}{TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273287|gb|AF191661.1|AF19166}
\PYG{g+go}{TATACATAAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273286|gb|AF191660.1|AF19166}
\PYG{g+go}{TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273285|gb|AF191659.1|AF19165}
\PYG{g+go}{TATACATTAAAGAAGGGGGATGCGGATAAATGGAAAGGCGAAAG...AGA gi|6273284|gb|AF191658.1|AF19165}
\end{Verbatim}
