\begin{Verbatim}[commandchars=\\\{\}]
\PYG{k+kn}{from} \PYG{n+nn}{Bio} \PYG{k+kn}{import} \PYG{n}{AlignIO}

\PYG{n}{count} \PYG{o}{=} \PYG{n}{AlignIO}\PYG{o}{.}\PYG{n}{convert}\PYG{p}{(}\PYG{l+s+s2}{\PYGZdq{}PF05371\PYGZus{}seed.sth\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}stockholm\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}PF05371\PYGZus{}seed.aln\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}clustal\PYGZdq{}}\PYG{p}{)}
\PYG{k}{print}\PYG{p}{(}\PYG{l+s+s2}{\PYGZdq{}Converted }\PYG{l+s+si}{\PYGZpc{}i}\PYG{l+s+s2}{ alignments\PYGZdq{}} \PYG{o}{\PYGZpc{}} \PYG{n}{count}\PYG{p}{)}
\end{Verbatim}
