\begin{Verbatim}[commandchars=\\\{\}]
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{k+kn}{from} \PYG{n+nn}{Bio} \PYG{k+kn}{import} \PYG{n}{SeqIO}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{SeqIO}\PYG{o}{.}\PYG{n}{convert}\PYG{p}{(}\PYG{l+s+s2}{\PYGZdq{}E3MFGYR02\PYGZus{}random\PYGZus{}10\PYGZus{}reads.sff\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}sff\PYGZhy{}trim\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}trimmed.fasta\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}fasta\PYGZdq{}}\PYG{p}{)}
\PYG{g+go}{10}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{SeqIO}\PYG{o}{.}\PYG{n}{convert}\PYG{p}{(}\PYG{l+s+s2}{\PYGZdq{}E3MFGYR02\PYGZus{}random\PYGZus{}10\PYGZus{}reads.sff\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}sff\PYGZhy{}trim\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}trimmed.qual\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}qual\PYGZdq{}}\PYG{p}{)}
\PYG{g+go}{10}
\PYG{g+gp}{\PYGZgt{}\PYGZgt{}\PYGZgt{} }\PYG{n}{SeqIO}\PYG{o}{.}\PYG{n}{convert}\PYG{p}{(}\PYG{l+s+s2}{\PYGZdq{}E3MFGYR02\PYGZus{}random\PYGZus{}10\PYGZus{}reads.sff\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}sff\PYGZhy{}trim\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}trimmed.fastq\PYGZdq{}}\PYG{p}{,} \PYG{l+s+s2}{\PYGZdq{}fastq\PYGZdq{}}\PYG{p}{)}
\PYG{g+go}{10}
\end{Verbatim}
