Package mvpa :: Package datasets :: Module miscfx :: Class SequenceStats

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# Class SequenceStats

source code

Simple helper to provide representation of sequence statistics

Matlab analog: http://cfn.upenn.edu/aguirre/code/matlablib/mseq/mtest.m

WARNING: Experimental -- API might change without warning! Current implementation is ugly!

Instance Methods | [hide private]

    new empty dictionary

__init__(self, seq, order=2) Initialize SequenceStats | source code

__repr__(self) Representation of SequenceStats | source code

__str__(self) str(x) | source code

__compute(self) Compute stats and string representation | source code

plot(self) Plot correlation coefficients | source code

Inherited from `dict`: `__cmp__`, `__contains__`, `__delitem__`, `__eq__`, `__ge__`, `__getattribute__`, `__getitem__`, `__gt__`, `__iter__`, `__le__`, `__len__`, `__lt__`, `__ne__`, `__new__`, `__setitem__`, `__sizeof__`, `clear`, `copy`, `fromkeys`, `get`, `has_key`, `items`, `iteritems`, `iterkeys`, `itervalues`, `keys`, `pop`, `popitem`, `setdefault`, `update`, `values`, `viewitems`, `viewkeys`, `viewvalues`

Inherited from `object`: `__delattr__`, `__format__`, `__reduce__`, `__reduce_ex__`, `__setattr__`, `__subclasshook__`

Class Variables | [hide private]

Inherited from `dict`: `__hash__`

Properties | [hide private]

Inherited from `object`: `__class__`

Method Details | [hide private]

### __init__(self, seq, order=2)
(Constructor)

source code

Initialize SequenceStats

Parameters:
  - `seq` (list or ndarray) - Actual sequence of labels
  - `order` (int) - Maximal order of counter-balancing check. For perfect counterbalancing all matrices should be identical
Returns:

    new empty dictionary

Overrides: object.__init__

### __repr__(self)
(Representation operator)

source code

Representation of SequenceStats

Overrides: object.__repr__

### __str__(self)
(Informal representation operator)

source code

str(x)

Overrides: object.__str__
  (inherited documentation)