Package: pycoqc
Version: 2.5.2+dfsg-4
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 194
Depends: python3-h5py, python3-jinja2, python3-numpy, python3-pandas, python3-plotly (>= 4.1.0), python3-pysam, python3-scipy, python3-tqdm, python3:any, python3-pkg-resources
Section: science
Priority: optional
Homepage: https://github.com/a-slide/pycoQC
Description: computes metrics and generates Interactive QC plots
 PycoQC computes metrics and generates interactive QC plots for Oxford
 Nanopore technologies sequencing data
 .
 PycoQC relies on the sequencing_summary.txt file generated by Albacore
 and Guppy, but if needed it can also generates a summary file from
 basecalled fast5 files. The package supports 1D and 1D2 runs generated
 with Minion, Gridion and Promethion devices and basecalled with Albacore
 1.2.1+ or Guppy 2.1.3+
