Package: python3-presto
Source: presto
Version: 0.7.6-1
Architecture: arm64
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 219
Depends: python3-biopython, python3-numpy, python3-packaging, python3-pandas, python3-scipy, python3:any, vsearch, cd-hit, ncbi-blast+
Section: python
Priority: optional
Homepage: https://presto.readthedocs.io
Description: toolkit for processing B and T cell sequences (Python3 module)
 pRESTO is a toolkit for processing raw reads from high-throughput
 sequencing of B cell and T cell repertoires.
 .
 Dramatic improvements in high-throughput sequencing technologies now
 enable large-scale characterization of lymphocyte repertoires, defined
 as the collection of trans-membrane antigen-receptor proteins located on
 the surface of B cells and T cells. The REpertoire Sequencing TOolkit
 (pRESTO) is composed of a suite of utilities to handle all stages
 of sequence processing prior to germline segment assignment. pRESTO
 is designed to handle either single reads or paired-end reads. It
 includes features for quality control, primer masking, annotation of
 reads with sequence embedded barcodes, generation of unique molecular
 identifier (UMI) consensus sequences, assembly of paired-end reads and
 identification of duplicate sequences. Numerous options for sequence
 sorting, sampling and conversion operations are also included.
 .
 This package provides the presto Python3 module.
