# Serialized Form

## Package com.pixelmed.apps

### Class com.pixelmed.apps.DoseUtility

class DoseUtility extends ApplicationFrame implements Serializable

#### Serialized Fields

##### activeThread

    Thread activeThread

##### caseSensitiveCodeMeaningValidationCheckBox

    JCheckBox caseSensitiveCodeMeaningValidationCheckBox

##### currentDatabaseTreeRecordSelections

    DatabaseTreeRecord[] currentDatabaseTreeRecordSelections

##### currentRemoteQueryInformationModel

    QueryInformationModel currentRemoteQueryInformationModel

##### currentRemoteQueryTreeBrowser

    QueryTreeBrowser currentRemoteQueryTreeBrowser

##### cursorChanger

    SafeCursorChanger cursorChanger

##### deidentifyWhenSendingToRegistryCheckBox

    JCheckBox deidentifyWhenSendingToRegistryCheckBox

##### ftpApplicationProperties

    FTPApplicationProperties ftpApplicationProperties

##### ftpRemoteHostInformation

    FTPRemoteHostInformation ftpRemoteHostInformation

##### importDirectoryPath

    String importDirectoryPath

##### logger

    MessageLogger logger

##### networkApplicationInformation

    NetworkApplicationInformation networkApplicationInformation

##### networkApplicationProperties

    NetworkApplicationProperties networkApplicationProperties

##### ourCalledAETitle

    String ourCalledAETitle

##### processOnlyDoseSeriesRecordCheckBox

    JCheckBox processOnlyDoseSeriesRecordCheckBox

##### progressBarUpdater

    SafeProgressBarUpdaterThread progressBarUpdater

##### queryFilterPatientIDTextField

    JTextField queryFilterPatientIDTextField

##### queryFilterPatientNameTextField

    JTextField queryFilterPatientNameTextField

##### queryFilterStudyDateTextField

    JTextField queryFilterStudyDateTextField

##### remoteQueryRetrievePanel

    JPanel remoteQueryRetrievePanel

##### reportTabularLayoutCheckBox

    JCheckBox reportTabularLayoutCheckBox

##### retrieveOnlyDoseSeriesRecordCheckBox

    JCheckBox retrieveOnlyDoseSeriesRecordCheckBox

##### savedImagesFolder

    File savedImagesFolder

##### showDetailedLogCheckBox

    JCheckBox showDetailedLogCheckBox

##### showOnlyDoseSummaryCheckBox

    JCheckBox showOnlyDoseSummaryCheckBox

##### srcDatabase

    DatabaseInformationModel srcDatabase

##### srcDatabasePanel

    JPanel srcDatabasePanel

##### storageSOPClassSCPDispatcher

    StorageSOPClassSCPDispatcher storageSOPClassSCPDispatcher

### Class com.pixelmed.apps.DownloadOrTransmit

class DownloadOrTransmit extends ApplicationFrame implements Serializable

#### Serialized Fields

##### activeThread

    Thread activeThread

##### addDicomDirectoryCheckBox

    JCheckBox addDicomDirectoryCheckBox

##### currentDatabaseTreeRecordSelections

    DatabaseTreeRecord[] currentDatabaseTreeRecordSelections

##### currentRemoteQueryInformationModel

    QueryInformationModel currentRemoteQueryInformationModel

##### currentRemoteQuerySelectionLevel

    String currentRemoteQuerySelectionLevel

##### currentRemoteQuerySelectionQueryTreeRecord

    QueryTreeRecord currentRemoteQuerySelectionQueryTreeRecord

##### currentRemoteQuerySelectionRetrieveAE

    String currentRemoteQuerySelectionRetrieveAE

##### currentRemoteQuerySelectionUniqueKey

    Attribute currentRemoteQuerySelectionUniqueKey

##### currentRemoteQuerySelectionUniqueKeys

    AttributeList currentRemoteQuerySelectionUniqueKeys

##### currentRemoteQueryTreeBrowser

    QueryTreeBrowser currentRemoteQueryTreeBrowser

##### cursorChanger

    SafeCursorChanger cursorChanger

##### exportDirectoryPath

    String exportDirectoryPath

##### ftpApplicationProperties

    FTPApplicationProperties ftpApplicationProperties

##### ftpRemoteHostInformation

    FTPRemoteHostInformation ftpRemoteHostInformation

##### hierarchicalExportCheckBox

    JCheckBox hierarchicalExportCheckBox

##### importDirectoryPath

    String importDirectoryPath

##### logger

    MessageLogger logger

##### networkApplicationInformation

    NetworkApplicationInformation networkApplicationInformation

##### networkApplicationProperties

    NetworkApplicationProperties networkApplicationProperties

##### ourCalledAETitle

    String ourCalledAETitle

##### progressBarUpdater

    SafeProgressBarUpdaterThread progressBarUpdater

##### queryFilterPatientIDTextField

    JTextField queryFilterPatientIDTextField

##### queryFilterPatientNameTextField

    JTextField queryFilterPatientNameTextField

##### queryFilterStudyDateTextField

    JTextField queryFilterStudyDateTextField

##### remoteQueryRetrievePanel

    JPanel remoteQueryRetrievePanel

##### savedImagesFolder

    File savedImagesFolder

##### showDetailedLogCheckBox

    JCheckBox showDetailedLogCheckBox

##### srcDatabase

    DatabaseInformationModel srcDatabase

##### srcDatabasePanel

    JPanel srcDatabasePanel

##### storageSOPClassSCPDispatcher

    StorageSOPClassSCPDispatcher storageSOPClassSCPDispatcher

##### zipExportCheckBox

    JCheckBox zipExportCheckBox

### Class com.pixelmed.apps.MergeCompositeContext.Group

class Group extends TreeSet<String> implements Serializable

#### Serialized Fields

##### context

    CompositeInstanceContext context

##### identity

    String identity

##### sequenceNumber

    int sequenceNumber

## Package com.pixelmed.convert

### Exception com.pixelmed.convert.AnalyzeException

class AnalyzeException extends Exception implements Serializable

### Exception com.pixelmed.convert.NIfTI1Exception

class NIfTI1Exception extends Exception implements Serializable

### Exception com.pixelmed.convert.NRRDException

class NRRDException extends Exception implements Serializable

### Exception com.pixelmed.convert.TIFFException

class TIFFException extends Exception implements Serializable

## Package com.pixelmed.database

### Class com.pixelmed.database.MapTableBrowser

class MapTableBrowser extends JTable implements Serializable

### Class com.pixelmed.database.MapTableModel

class MapTableModel extends AbstractTableModel implements Serializable

#### Serialized Fields

##### columnCount

    int columnCount

##### columnNames

    String[] columnNames

##### data

    Object[][] data

##### excludeList

    HashSet excludeList

##### includeList

    HashSet includeList

##### rowCount

    int rowCount

## Package com.pixelmed.dicom

### Class com.pixelmed.dicom.AttributeList

class AttributeList extends TreeMap<AttributeTag,Attribute> implements Serializable

#### Serialized Fields

##### colorSpaceWasConvertedToRGBDuringDecompression

    boolean colorSpaceWasConvertedToRGBDuringDecompression

##### colorSpaceWillBeConvertedToRGBDuringDecompression

    boolean colorSpaceWillBeConvertedToRGBDuringDecompression

##### compressionRatio

    double compressionRatio

##### decompressPixelData

    boolean decompressPixelData

##### iioMetadata

    IIOMetadata[] iioMetadata

##### isJPEGFamily

    boolean isJPEGFamily

##### isRLE

    boolean isRLE

##### lossyMethod

    String lossyMethod

##### pixelDataIsLossy

    boolean pixelDataIsLossy

##### pixelDataWasActuallyDecompressed

    boolean pixelDataWasActuallyDecompressed

##### readerWanted

    String readerWanted

### Class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModel

class AttributeListFunctionalGroupsTableModel extends AttributeListTableModel implements Serializable

### Class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelAllFrames

class AttributeListFunctionalGroupsTableModelAllFrames extends AttributeListFunctionalGroupsTableModel implements Serializable

#### Serialized Fields

##### set

    TreeSet set

##### values

    HashMap values

### Class com.pixelmed.dicom.AttributeListFunctionalGroupsTableModelOneFrame

class AttributeListFunctionalGroupsTableModelOneFrame extends AttributeListFunctionalGroupsTableModel implements Serializable

#### Serialized Fields

##### set

    TreeSet set

##### values

    HashMap values

### Class com.pixelmed.dicom.AttributeListTableBrowser

class AttributeListTableBrowser extends JTable implements Serializable

### Class com.pixelmed.dicom.AttributeListTableModel

class AttributeListTableModel extends AbstractTableModel implements Serializable

#### Serialized Fields

##### columnCount

    int columnCount

##### columnNames

    String[] columnNames

##### data

    Object[][] data

##### excludeList

    HashSet excludeList

##### includeList

    HashSet includeList

##### rowCount

    int rowCount

### Exception com.pixelmed.dicom.DicomException

class DicomException extends Exception implements Serializable

### Class com.pixelmed.dicom.SetOfDicomFiles

class SetOfDicomFiles extends HashSet<SetOfDicomFiles.DicomFile> implements Serializable

#### Serialized Fields

##### setOfSOPClassUIDs

    HashSet setOfSOPClassUIDs

### Class com.pixelmed.dicom.SetOfFrameSets

class SetOfFrameSets extends HashSet<FrameSet> implements Serializable

### Class com.pixelmed.dicom.StandaloneAttributeTreeBrowser

class StandaloneAttributeTreeBrowser extends JFrame implements Serializable

### Class com.pixelmed.dicom.StructuredReportBrowser

class StructuredReportBrowser extends JFrame implements Serializable

#### Serialized Fields

##### tree

    JTree tree

Deprecated.

##### treeModel

    StructuredReport treeModel

Deprecated.

## Package com.pixelmed.display

### Class com.pixelmed.display.ApplicationFrame

class ApplicationFrame extends JFrame implements Serializable

#### Serialized Fields

##### applicationProperties

    Properties applicationProperties

##### applicationPropertyFileName

    String applicationPropertyFileName

##### statusBarManager

    com.pixelmed.display.StatusBarManager statusBarManager

### Class com.pixelmed.display.DicomBrowser

class DicomBrowser extends ApplicationFrame implements Serializable

### Class com.pixelmed.display.DicomCleaner

class DicomCleaner extends ApplicationFrame implements Serializable

#### Serialized Fields

##### acceptAnyTransferSyntaxCheckBox

    JCheckBox acceptAnyTransferSyntaxCheckBox

##### activeThread

    Thread activeThread

##### addContributingEquipmentCheckBox

    JCheckBox addContributingEquipmentCheckBox

##### aggregateAgesOver89CheckBox

    JCheckBox aggregateAgesOver89CheckBox

##### cleanUIDsCheckBox

    JCheckBox cleanUIDsCheckBox

##### currentDestinationDatabaseSelections

    DatabaseTreeRecord[] currentDestinationDatabaseSelections

##### currentDestinationFilePathSelections

    Vector currentDestinationFilePathSelections

##### currentRemoteQueryInformationModel

    QueryInformationModel currentRemoteQueryInformationModel

##### currentRemoteQuerySelectionLevel

    String currentRemoteQuerySelectionLevel

##### currentRemoteQuerySelectionQueryTreeRecord

    QueryTreeRecord currentRemoteQuerySelectionQueryTreeRecord

##### currentRemoteQuerySelectionRetrieveAE

    String currentRemoteQuerySelectionRetrieveAE

##### currentRemoteQuerySelectionUniqueKey

    Attribute currentRemoteQuerySelectionUniqueKey

##### currentRemoteQuerySelectionUniqueKeys

    AttributeList currentRemoteQuerySelectionUniqueKeys

##### currentSourceDatabaseSelections

    DatabaseTreeRecord[] currentSourceDatabaseSelections

##### currentSourceFilePathSelections

    Vector currentSourceFilePathSelections

##### cursorChanger

    SafeCursorChanger cursorChanger

##### dstDatabase

    DatabaseInformationModel dstDatabase

##### dstDatabasePanel

    JPanel dstDatabasePanel

##### earliestDatesIndexedBySourceFilePath

    Map<String,Date> earliestDatesIndexedBySourceFilePath

##### exportDirectoryPath

    String exportDirectoryPath

##### hierarchicalExportCheckBox

    JCheckBox hierarchicalExportCheckBox

##### importDirectoryPath

    String importDirectoryPath

##### logger

    MessageLogger logger

##### modifyDatesCheckBox

    JCheckBox modifyDatesCheckBox

##### modifyDatesTextField

    JTextField modifyDatesTextField

##### networkApplicationInformation

    NetworkApplicationInformation networkApplicationInformation

##### networkApplicationProperties

    NetworkApplicationProperties networkApplicationProperties

##### ourCalledAETitle

    String ourCalledAETitle

##### progressBarUpdater

    SafeProgressBarUpdaterThread progressBarUpdater

##### queryFilterAccessionNumberTextField

    JTextField queryFilterAccessionNumberTextField

##### queryFilterPatientIDTextField

    JTextField queryFilterPatientIDTextField

##### queryFilterPatientNameTextField

    JTextField queryFilterPatientNameTextField

##### queryFilterStudyDateTextField

    JTextField queryFilterStudyDateTextField

##### randomReplacementAccessionNumberLength

    int randomReplacementAccessionNumberLength

##### randomReplacementPatientIDLength

    int randomReplacementPatientIDLength

##### randomReplacementPatientNamePrefix

    String randomReplacementPatientNamePrefix

##### remoteQueryRetrievePanel

    JPanel remoteQueryRetrievePanel

##### removeAllStructuredContentCheckBox

    JCheckBox removeAllStructuredContentCheckBox

##### removeCharacteristicsCheckBox

    JCheckBox removeCharacteristicsCheckBox

##### removeClinicalTrialAttributesCheckBox

    JCheckBox removeClinicalTrialAttributesCheckBox

##### removeDescriptionsCheckBox

    JCheckBox removeDescriptionsCheckBox

##### removeDeviceIdentityCheckBox

    JCheckBox removeDeviceIdentityCheckBox

##### removeIdentityCheckBox

    JCheckBox removeIdentityCheckBox

##### removeInstitutionIdentityCheckBox

    JCheckBox removeInstitutionIdentityCheckBox

##### removePrivateCheckBox

    JCheckBox removePrivateCheckBox

##### removeProtocolNameCheckBox

    JCheckBox removeProtocolNameCheckBox

##### removeSeriesDescriptionsCheckBox

    JCheckBox removeSeriesDescriptionsCheckBox

##### removeUnsafeStructuredContentCheckBox

    JCheckBox removeUnsafeStructuredContentCheckBox

##### replaceAccessionNumberCheckBox

    JCheckBox replaceAccessionNumberCheckBox

##### replacementAccessionNumberTextField

    JTextField replacementAccessionNumberTextField

##### replacementPatientBirthDateTextField

    JTextField replacementPatientBirthDateTextField

##### replacementPatientIDTextField

    JTextField replacementPatientIDTextField

##### replacementPatientNameTextField

    JTextField replacementPatientNameTextField

##### replacePatientBirthDateCheckBox

    JCheckBox replacePatientBirthDateCheckBox

##### replacePatientIDCheckBox

    JCheckBox replacePatientIDCheckBox

##### replacePatientNameCheckBox

    JCheckBox replacePatientNameCheckBox

##### resourceBundle

    ResourceBundle resourceBundle

##### savedImagesFolder

    File savedImagesFolder

##### srcDatabase

    DatabaseInformationModel srcDatabase

##### srcDatabasePanel

    JPanel srcDatabasePanel

##### storageSOPClassSCPDispatcher

    StorageSOPClassSCPDispatcher storageSOPClassSCPDispatcher

##### zipExportCheckBox

    JCheckBox zipExportCheckBox

### Class com.pixelmed.display.DicomCleaner.OurDicomImageBlackout

class OurDicomImageBlackout extends DicomImageBlackout implements Serializable

### Class com.pixelmed.display.DicomImageBlackout

class DicomImageBlackout extends JFrame implements Serializable

#### Serialized Fields

##### applyActionListener

    DicomImageBlackout.ApplyActionListener applyActionListener

##### blackoutApplyButton

    JButton blackoutApplyButton

##### blackoutNextButton

    JButton blackoutNextButton

##### blackoutPreviousButton

    JButton blackoutPreviousButton

##### blackoutSaveButton

    JButton blackoutSaveButton

##### burnedinflag

    int burnedinflag

##### burnInOverlays

    boolean burnInOverlays

##### changesWereMade

    boolean changesWereMade

##### cineSlider

    JSlider cineSlider

##### cineSliderChangeListener

    DicomImageBlackout.CineSliderChangeListener cineSliderChangeListener

##### cineSliderControlsPanel

    JPanel cineSliderControlsPanel

##### currentFileName

    String currentFileName

##### currentFileNumber

    int currentFileNumber

##### deferredDecompression

    boolean deferredDecompression

##### dicomFileNames

    String[] dicomFileNames

##### imagePanel

    SingleImagePanel imagePanel

##### imagesRemainingLabel

    JLabel imagesRemainingLabel

##### list

    AttributeList list

##### mainPanel

    Box mainPanel

##### multiPanel

    JPanel multiPanel

##### nextActionListener

    DicomImageBlackout.NextActionListener nextActionListener

##### ourAETitle

    String ourAETitle

##### ourEventContext

    EventContext ourEventContext

##### ourFrameSelectionChangeListener

    com.pixelmed.display.DicomImageBlackout.OurFrameSelectionChangeListener ourFrameSelectionChangeListener

##### previousActionListener

    DicomImageBlackout.PreviousActionListener previousActionListener

##### previousColumns

    int previousColumns

##### previousPersistentDrawingShapes

    Vector previousPersistentDrawingShapes

##### previousRows

    int previousRows

##### redactedJPEGFile

    File redactedJPEGFile

##### resourceBundle

    ResourceBundle resourceBundle

##### saveActionListener

    DicomImageBlackout.SaveActionListener saveActionListener

##### sImg

    SourceImage sImg

##### statusNotificationHandler

    DicomImageBlackout.StatusNotificationHandler statusNotificationHandler

##### usedjpegblockredaction

    boolean usedjpegblockredaction

##### usePixelPaddingBlackoutValue

    boolean usePixelPaddingBlackoutValue

##### usePixelPaddingBlackoutValueCheckBox

    JCheckBox usePixelPaddingBlackoutValueCheckBox

##### useZeroBlackoutValue

    boolean useZeroBlackoutValue

##### useZeroBlackoutValueCheckBox

    JCheckBox useZeroBlackoutValueCheckBox

### Class com.pixelmed.display.DicomImageViewer

class DicomImageViewer extends ApplicationFrame implements Serializable

#### Serialized Fields

##### applicationHeight

    int applicationHeight

##### applicationWidth

    int applicationWidth

##### attributeFrameTableScrollPane

    JScrollPane attributeFrameTableScrollPane

##### attributeTreeScrollPane

    JScrollPane attributeTreeScrollPane

##### attributeTreeSortOrderButtons

    ButtonGroup attributeTreeSortOrderButtons

##### backgroundImageListMappedToFilenames

    TreeMap backgroundImageListMappedToFilenames

##### browserPane

    JTabbedPane browserPane

##### currentAttributeListForDatabaseImport

    AttributeList currentAttributeListForDatabaseImport

##### currentDatabaseTreeRecordSelections

    DatabaseTreeRecord[] currentDatabaseTreeRecordSelections

##### currentDicomDirectory

    DicomDirectory currentDicomDirectory

##### currentFilePathSelections

    Vector currentFilePathSelections

##### currentlyDisplayedInstanceFilePath

    String currentlyDisplayedInstanceFilePath

##### currentRemoteQueryFilter

    AttributeList currentRemoteQueryFilter

##### currentRemoteQueryInformationModel

    QueryInformationModel currentRemoteQueryInformationModel

##### currentRemoteQuerySelectionLevel

    String currentRemoteQuerySelectionLevel

##### currentRemoteQuerySelectionQueryTreeRecord

    QueryTreeRecord currentRemoteQuerySelectionQueryTreeRecord

##### currentRemoteQuerySelectionRetrieveAE

    String currentRemoteQuerySelectionRetrieveAE

##### currentRemoteQuerySelectionUniqueKey

    Attribute currentRemoteQuerySelectionUniqueKey

##### currentRemoteQuerySelectionUniqueKeys

    AttributeList currentRemoteQuerySelectionUniqueKeys

##### currentSourceIndex

    int currentSourceIndex

##### currentSourceSortOrder

    int[] currentSourceSortOrder

##### cursorChanger

    SafeCursorChanger cursorChanger

##### databaseApplicationProperties

    DatabaseApplicationProperties databaseApplicationProperties

##### databaseControlsPanel

    JPanel databaseControlsPanel

##### databaseInformationModel

    DatabaseInformationModel databaseInformationModel

##### databaseTreeScrollPane

    JScrollPane databaseTreeScrollPane

##### dicomdirControlsPanel

    JPanel dicomdirControlsPanel

##### dicomdirTreeScrollPane

    JScrollPane dicomdirTreeScrollPane

##### displayControlsPanel

    JPanel displayControlsPanel

##### displayListOfPossibleBackgroundImagesForSpectra

    JList displayListOfPossibleBackgroundImagesForSpectra

##### displayListOfPossibleReferenceImagesForImages

    JList displayListOfPossibleReferenceImagesForImages

##### displayListOfPossibleReferenceImagesForSpectra

    JList displayListOfPossibleReferenceImagesForSpectra

##### displayListOfPossibleReferenceImagesForTiledImages

    JList displayListOfPossibleReferenceImagesForTiledImages

##### displaySortPanel

    com.pixelmed.display.SourceImageSortOrderPanel displaySortPanel

##### imageLocalizerManager

    com.pixelmed.display.ImageLocalizerManager imageLocalizerManager

##### imagesPerCol

    int imagesPerCol

##### imagesPerRow

    int imagesPerRow

##### lastDirectoryPath

    String lastDirectoryPath

##### mainPanelFrameSelectionChangeListener

    com.pixelmed.display.DicomImageViewer.OurFrameSelectionChangeListener mainPanelFrameSelectionChangeListener

##### mainPanelFrameSortOrderChangeListener

    com.pixelmed.display.DicomImageViewer.OurFrameSortOrderChangeListener mainPanelFrameSortOrderChangeListener

##### modelOfCurrentAttributesForAllFramesBrowser

    AttributeListFunctionalGroupsTableModelAllFrames modelOfCurrentAttributesForAllFramesBrowser

##### modelOfCurrentAttributesForCurrentFrameBrowser

    AttributeListFunctionalGroupsTableModelOneFrame modelOfCurrentAttributesForCurrentFrameBrowser

##### multiPanel

    JPanel multiPanel

##### networkApplicationInformation

    NetworkApplicationInformation networkApplicationInformation

##### networkApplicationProperties

    NetworkApplicationProperties networkApplicationProperties

##### ourBrowserPaneChangeListener

    com.pixelmed.display.DicomImageViewer.OurBrowserPaneChangeListener ourBrowserPaneChangeListener

##### queryControlsPanel

    JPanel queryControlsPanel

##### queryTreeScrollPane

    JScrollPane queryTreeScrollPane

##### referenceImageListMappedToFilenames

    TreeMap referenceImageListMappedToFilenames

##### referenceImagePanelForImages

    JPanel referenceImagePanelForImages

##### referenceImagePanelForSpectra

    JPanel referenceImagePanelForSpectra

##### savedImagesFolder

    File savedImagesFolder

##### scrollPaneOfCurrentAttributes

    JScrollPane scrollPaneOfCurrentAttributes

##### sourceImageGraphicDisplaySelectorPanel

    com.pixelmed.display.SourceImageGraphicDisplaySelectorPanel sourceImageGraphicDisplaySelectorPanel

##### sourceImageShutterSelectorPanel

    com.pixelmed.display.SourceImageShutterSelectorPanel sourceImageShutterSelectorPanel

##### sourceImageVOILUTSelectorPanel

    com.pixelmed.display.SourceImageVOILUTSelectorPanel sourceImageVOILUTSelectorPanel

##### sourceImageWindowingAccelerationSelectorPanel

    com.pixelmed.display.SourceImageWindowingAccelerationSelectorPanel sourceImageWindowingAccelerationSelectorPanel

##### sourceImageWindowLinearCalculationSelectorPanel

    com.pixelmed.display.SourceImageWindowLinearCalculationSelectorPanel sourceImageWindowLinearCalculationSelectorPanel

##### spectroscopyControlsPanel

    JPanel spectroscopyControlsPanel

##### spectroscopyLocalizerManager

    com.pixelmed.display.SpectroscopyLocalizerManager spectroscopyLocalizerManager

##### spectroscopySortPanel

    com.pixelmed.display.SourceSpectrumSortOrderPanel spectroscopySortPanel

##### storedFilePathStrategy

    StoredFilePathStrategy storedFilePathStrategy

##### structuredReportTreeControlsPanel

    JPanel structuredReportTreeControlsPanel

##### structuredReportTreeScrollPane

    JScrollPane structuredReportTreeScrollPane

##### tableOfCurrentAttributesForAllFramesBrowser

    AttributeListTableBrowser tableOfCurrentAttributesForAllFramesBrowser

##### tableOfCurrentAttributesForCurrentFrameBrowser

    AttributeListTableBrowser tableOfCurrentAttributesForCurrentFrameBrowser

##### tiledDisplayControlsPanel

    JPanel tiledDisplayControlsPanel

##### tiledDisplaySortPanel

    com.pixelmed.display.TiledSourceImageSortOrderPanel tiledDisplaySortPanel

### Class com.pixelmed.display.DisplayStructuredReportBrowser

class DisplayStructuredReportBrowser extends com.pixelmed.dicom.StructuredReportBrowser implements Serializable

#### Serialized Fields

##### frameHeightWanted

    int frameHeightWanted

##### frameWidthWanted

    int frameWidthWanted

##### mapOfSOPInstanceUIDToReferencedFileName

    Map mapOfSOPInstanceUIDToReferencedFileName

### Class com.pixelmed.display.IconListBrowser.OurCellRenderer

class OurCellRenderer extends JLabel implements Serializable

### Class com.pixelmed.display.PlotGraph

class PlotGraph extends JComponent implements Serializable

#### Serialized Fields

##### heightOfTile

    float heightOfTile

##### imageOfRenderedPlot

    BufferedImage imageOfRenderedPlot

##### nTilesPerColumn

    int nTilesPerColumn

##### nTilesPerRow

    int nTilesPerRow

##### samples

    float[] samples

##### samplesPerRow

    int samplesPerRow

##### samplesPerTile

    int samplesPerTile

##### statistics

    PlotGraph.FloatArrayStatistics statistics

##### widthOfTile

    float widthOfTile

### Class com.pixelmed.display.SingleImagePanel

class SingleImagePanel extends JComponent implements Serializable

#### Serialized Fields

##### activeSuperimposedImagesAppliedToUnderlyingImage

    Set<SuperimposedImage.AppliedToUnderlyingImage> activeSuperimposedImagesAppliedToUnderlyingImage

##### applyShutter

    boolean applyShutter

##### bitsPerEntry

    int bitsPerEntry

##### blueTable

    short[] blueTable

##### cachedPreWindowedImage

    BufferedImage cachedPreWindowedImage

##### cachedResizedImage

    BufferedImage cachedResizedImage

##### cachedResizedSelectedRegionImage

    BufferedImage cachedResizedSelectedRegionImage

##### cachedWindowSize

    Rectangle cachedWindowSize

##### currentLocationIn3DSpace

    double[] currentLocationIn3DSpace

This value is outside mouseMoved() only so that it doesn't need to be constantly reallocated - it is not used by any other method

##### currentSrcImageIndex

    int currentSrcImageIndex

##### currentSrcImageSortOrder

    int[] currentSrcImageSortOrder

##### currentVOITransformInUse

    int currentVOITransformInUse

if -1, then use statistical value first time then user adjusted values subsequently if greater than or equal to 0, then use selected VOI transform (if there is one for that frame)

##### currentx

    int currentx

##### currenty

    int currenty

##### demographicAndTechniqueAnnotations

    DemographicAndTechniqueAnnotations demographicAndTechniqueAnnotations

##### demographicAndTechniqueColor

    Color demographicAndTechniqueColor

##### demographicAndTechniqueFont

    Font demographicAndTechniqueFont

##### displayShutter

    DisplayShutter displayShutter

##### firstvalueMapped

    int firstvalueMapped

##### greenTable

    short[] greenTable

##### hasPad

    boolean hasPad

##### imageGeometry

    GeometryOfVolume imageGeometry

##### imageToWindowCoordinateTransform

    AffineTransform imageToWindowCoordinateTransform

##### imgMax

    double imgMax

##### imgMin

    double imgMin

##### interactiveDrawingShapes

    Vector<Shape> interactiveDrawingShapes

##### inverted

    boolean inverted

##### largestGray

    int largestGray

##### lastmiddley

    int lastmiddley

##### lastx

    int lastx

##### lasty

    int lasty

##### leftMouseMode

    SingleImagePanel.LeftMouseMode leftMouseMode

##### localizerShapes

    Vector<Shape> localizerShapes

##### modalityTransform

    ModalityTransform modalityTransform

##### numberOfEntries

    int numberOfEntries

##### offsetDrawingOfResizedSelectedRegionImageX

    int offsetDrawingOfResizedSelectedRegionImageX

##### offsetDrawingOfResizedSelectedRegionImageY

    int offsetDrawingOfResizedSelectedRegionImageY

##### orientationAnnotations

    com.pixelmed.display.OrientationAnnotations orientationAnnotations

##### orientationColor

    Color orientationColor

##### orientationFont

    Font orientationFont

##### originalDisplayedAreaSelection

    DisplayedAreaSelection originalDisplayedAreaSelection

##### ourApplyShutterChangeListener

    com.pixelmed.display.SingleImagePanel.OurApplyShutterChangeListener ourApplyShutterChangeListener

##### ourFrameSelectionChangeListener

    com.pixelmed.display.SingleImagePanel.OurFrameSelectionChangeListener ourFrameSelectionChangeListener

##### ourFrameSortOrderChangeListener

    com.pixelmed.display.SingleImagePanel.OurFrameSortOrderChangeListener ourFrameSortOrderChangeListener

##### ourGraphicDisplayChangeListener

    com.pixelmed.display.SingleImagePanel.OurGraphicDisplayChangeListener ourGraphicDisplayChangeListener

##### ourVOIFunctionChangeListener

    com.pixelmed.display.SingleImagePanel.OurVOIFunctionChangeListener ourVOIFunctionChangeListener

##### ourWindowCenterAndWidthChangeListener

    com.pixelmed.display.SingleImagePanel.OurWindowCenterAndWidthChangeListener ourWindowCenterAndWidthChangeListener

##### ourWindowingAccelerationValueChangeListener

    com.pixelmed.display.SingleImagePanel.OurWindowingAccelerationValueChangeListener ourWindowingAccelerationValueChangeListener

##### ourWindowLinearCalculationChangeListener

    com.pixelmed.display.SingleImagePanel.OurWindowLinearCalculationChangeListener ourWindowLinearCalculationChangeListener

##### overlay

    Overlay overlay

##### pad

    int pad

##### padRangeLimit

    int padRangeLimit

##### panningMultiplier

    double panningMultiplier

##### perFrameDrawingShapes

    Vector<Shape>[] perFrameDrawingShapes

##### persistentDrawingShapes

    Vector<Shape> persistentDrawingShapes

##### persistentDrawingText

    Vector<com.pixelmed.display.TextAnnotation> persistentDrawingText

##### pixelSpacingInSourceImage

    double pixelSpacingInSourceImage

##### preDefinedShapes

    Vector<Shape> preDefinedShapes

##### preDefinedText

    Vector<Shape> preDefinedText

##### preTransformImageRelativeCoordinates

    AffineTransform preTransformImageRelativeCoordinates

##### realWorldValueTransform

    RealWorldValueTransform realWorldValueTransform

##### redTable

    short[] redTable

##### resampler

    BufferedImageUtilities resampler

##### selectedDrawingShapes

    Vector<Shape> selectedDrawingShapes

##### showOrientationsLeftSide

    boolean showOrientationsLeftSide

##### showOverlays

    boolean showOverlays

##### showSideAndViewAnnotationLeftSide

    boolean showSideAndViewAnnotationLeftSide

##### showSuperimposedImages

    boolean showSuperimposedImages

##### showZoomFactor

    boolean showZoomFactor

##### showZoomFactorLeftSide

    boolean showZoomFactorLeftSide

##### sideAndViewAnnotationColor

    Color sideAndViewAnnotationColor

##### sideAndViewAnnotationFont

    Font sideAndViewAnnotationFont

##### sideAndViewAnnotationString

    String sideAndViewAnnotationString

##### sideAndViewAnnotationVerticalOffset

    int sideAndViewAnnotationVerticalOffset

##### signBit

    int signBit

##### signed

    boolean signed

##### signMask

    int signMask

##### sImg

    SourceImage sImg

##### superimposedImages

    Vector<SuperimposedImage> superimposedImages

##### suvTransform

    SUVTransform suvTransform

##### typeOfPanelEventContext

    EventContext typeOfPanelEventContext

##### typeOfPixelSpacing

    String typeOfPixelSpacing

##### useConvertToMostFavorableImageType

    boolean useConvertToMostFavorableImageType

##### useDisplayedAreaSelection

    DisplayedAreaSelection useDisplayedAreaSelection

##### useIntercept

    double useIntercept

the value of rescale intercept to use for current frame (set when new frame selected)

##### useSlope

    double useSlope

the value of rescale slope to use for current frame (set when new frame selected)

##### useVOIFunction

    int useVOIFunction

##### useVOILUTNotFunction

    boolean useVOILUTNotFunction

whether or not to use the supplied VOI LUT, rather than a linear or sigmoid window function

##### useWindowLinearExactCalculationInsteadOfDICOMStandardMethod

    boolean useWindowLinearExactCalculationInsteadOfDICOMStandardMethod

##### voiLUTBitsPerEntry

    int voiLUTBitsPerEntry

the currently selected VOI LUT bits per entry

##### voiLUTData

    short[] voiLUTData

the currently selected VOI LUT Data

##### voiLUTEntryMax

    int voiLUTEntryMax

the currently selected VOI LUT maximum entry value

##### voiLUTEntryMin

    int voiLUTEntryMin

the currently selected VOI LUT minimum entry value

##### voiLUTFirstValueMapped

    int voiLUTFirstValueMapped

the currently selected VOI LUT first value mapped

##### voiLUTIdentityWindowCenter

    double voiLUTIdentityWindowCenter

the currently selected VOI LUT window center value that will result in the application of the VOI LUT rescaling the input (index) values

##### voiLUTIdentityWindowWidth

    double voiLUTIdentityWindowWidth

the currently selected VOI LUT window width value that will result in the application of the VOI LUT rescaling the input (index) values

##### voiLUTNumberOfEntries

    int voiLUTNumberOfEntries

the currently selected VOI LUT number of entries

##### voiLUTTopOfEntryRange

    int voiLUTTopOfEntryRange

the currently selected VOI LUT top of entry range (which may be less than (2^voiLUTNumberOfEntries)-1, e.g., in buggy Agfa images)

##### voiTransform

    VOITransform voiTransform

##### volumeLocalizationShapes

    Vector<Shape> volumeLocalizationShapes

##### windowCenter

    double windowCenter

the currently selected, default or user modified window center

##### windowingAccelerationValue

    double windowingAccelerationValue

##### windowingMultiplier

    double windowingMultiplier

##### windowToImageCoordinateTransform

    AffineTransform windowToImageCoordinateTransform

##### windowWidth

    double windowWidth

the currently selected, default or user modified window width

##### ybr

    boolean ybr

### Class com.pixelmed.display.SpectraPanel

class SpectraPanel extends PlotGraph implements Serializable

#### Serialized Fields

##### backgroundImageEventContext

    EventContext backgroundImageEventContext

##### backgroundSImg

    SourceImage backgroundSImg

##### backgroundSrcImageGeometry

    GeometryOfVolume backgroundSrcImageGeometry

##### cachedBackgroundImage

    BufferedImage cachedBackgroundImage

##### cacheForBounds

    Rectangle cacheForBounds

##### cacheOfImagesForSpectra

    HashMap cacheOfImagesForSpectra

##### currentBackgroundSrcImageIndex

    int currentBackgroundSrcImageIndex

##### currentBackgroundSrcImageSortOrder

    int[] currentBackgroundSrcImageSortOrder

##### currentSrcSpectraSortOrder

    int[] currentSrcSpectraSortOrder

##### currentSrcSpectrumIndex

    int currentSrcSpectrumIndex

##### lastmiddley

    int lastmiddley

##### nSrcSpectra

    int nSrcSpectra

##### ourBackgroundSourceImageSelectionChangeListener

    com.pixelmed.display.SpectraPanel.OurBackgroundSourceImageSelectionChangeListener ourBackgroundSourceImageSelectionChangeListener

##### ourFrameSelectionChangeListener

    com.pixelmed.display.SpectraPanel.OurFrameSelectionChangeListener ourFrameSelectionChangeListener

##### ourFrameSortOrderChangeListener

    com.pixelmed.display.SpectraPanel.OurFrameSortOrderChangeListener ourFrameSortOrderChangeListener

##### spectroscopyGeometry

    GeometryOfVolume spectroscopyGeometry

##### spectroscopyVolumeLocalization

    SpectroscopyVolumeLocalization spectroscopyVolumeLocalization

##### srcSpectra

    float[][] srcSpectra

##### typeOfPanelEventContext

    EventContext typeOfPanelEventContext

## Package com.pixelmed.displaywave

### Class com.pixelmed.displaywave.ECGPanel

class ECGPanel extends JComponent implements Serializable

#### Serialized Fields

##### amplitudeScalingFactorInMilliVolts

    float[] amplitudeScalingFactorInMilliVolts

##### channelNames

    String[] channelNames

##### displaySequence

    int[] displaySequence

##### height

    int height

##### heightOfPixelInMilliVolts

    float heightOfPixelInMilliVolts

##### imageOfRenderedPlot

    BufferedImage imageOfRenderedPlot

##### nSamplesPerChannel

    int nSamplesPerChannel

##### nSamplesPerRow

    int nSamplesPerRow

##### nTilesPerColumn

    int nTilesPerColumn

##### nTilesPerRow

    int nTilesPerRow

##### numberOfChannels

    int numberOfChannels

##### samples

    short[][] samples

##### samplingIntervalInMilliSeconds

    float samplingIntervalInMilliSeconds

##### timeOffsetInMilliSeconds

    float timeOffsetInMilliSeconds

##### width

    int width

##### widthOfPixelInMilliSeconds

    float widthOfPixelInMilliSeconds

### Class com.pixelmed.displaywave.ECGViewer

class ECGViewer extends ApplicationFrame implements Serializable

#### Serialized Fields

##### applicationHeight

    int applicationHeight

##### applicationWidth

    int applicationWidth

##### defaultHeightOfTileInMicroVolts

    int defaultHeightOfTileInMicroVolts

##### defaultHorizontalScalingInMilliMetresPerSecond

    int defaultHorizontalScalingInMilliMetresPerSecond

##### defaultVerticalScalingInMilliMetresPerMilliVolt

    int defaultVerticalScalingInMilliMetresPerMilliVolt

##### heightOfTileSliderLabel

    String heightOfTileSliderLabel

##### horizontalScalingSliderLabel

    String horizontalScalingSliderLabel

##### lastDirectoryPath

    String lastDirectoryPath

##### majorIntervalHeightOfTileInMicroVolts

    int majorIntervalHeightOfTileInMicroVolts

##### majorIntervalHorizontalScalingInMilliMetresPerSecond

    int majorIntervalHorizontalScalingInMilliMetresPerSecond

##### majorIntervalVerticalScalingInMilliMetresPerMilliVolt

    int majorIntervalVerticalScalingInMilliMetresPerMilliVolt

##### maximumHeightOfTileInMicroVolts

    int maximumHeightOfTileInMicroVolts

##### maximumHorizontalScalingInMilliMetresPerSecond

    int maximumHorizontalScalingInMilliMetresPerSecond

##### maximumSliderHeight

    int maximumSliderHeight

##### maximumSliderWidth

    int maximumSliderWidth

##### maximumVerticalScalingInMilliMetresPerMilliVolt

    int maximumVerticalScalingInMilliMetresPerMilliVolt

##### milliMetresPerPixel

    float milliMetresPerPixel

##### minimumAttributeTreePaneWidth

    int minimumAttributeTreePaneWidth

##### minimumHeightOfTileInMicroVolts

    int minimumHeightOfTileInMicroVolts

##### minimumHorizontalScalingInMilliMetresPerSecond

    int minimumHorizontalScalingInMilliMetresPerSecond

##### minimumVerticalScalingInMilliMetresPerMilliVolt

    int minimumVerticalScalingInMilliMetresPerMilliVolt

##### minorIntervalHeightOfTileInMicroVolts

    int minorIntervalHeightOfTileInMicroVolts

##### minorIntervalHorizontalScalingInMilliMetresPerSecond

    int minorIntervalHorizontalScalingInMilliMetresPerSecond

##### minorIntervalVerticalScalingInMilliMetresPerMilliVolt

    int minorIntervalVerticalScalingInMilliMetresPerMilliVolt

##### verticalScalingSliderLabel

    String verticalScalingSliderLabel

## Package com.pixelmed.ftp

### Exception com.pixelmed.ftp.FTPException

class FTPException extends Exception implements Serializable

## Package com.pixelmed.network

### Class com.pixelmed.network.ApplicationEntityMap

class ApplicationEntityMap extends TreeMap implements Serializable

### Exception com.pixelmed.network.AReleaseException

class AReleaseException extends Exception implements Serializable

### Exception com.pixelmed.network.DicomNetworkException

class DicomNetworkException extends Exception implements Serializable

## Package com.pixelmed.query

### Class com.pixelmed.query.FilterPanel

class FilterPanel extends JPanel implements Serializable

#### Serialized Fields

##### filterList

    AttributeList filterList

##### layout

    GridBagLayout layout

## Package com.pixelmed.utils

### Class com.pixelmed.utils.JTreeWithAdditionalKeyStrokeActions

class JTreeWithAdditionalKeyStrokeActions extends JTree implements Serializable

### Exception com.pixelmed.utils.PdfException

class PdfException extends Exception implements Serializable

### Exception com.pixelmed.utils.PhoneticStringEncoderException

class PhoneticStringEncoderException extends Exception implements Serializable