Package picard.fingerprint

# Class FingerprintUtils.VariantContextSet

java.lang.Object
java.util.AbstractCollection<E>
java.util.AbstractSet<E>
java.util.TreeSet<htsjdk.variant.variantcontext.VariantContext>
picard.fingerprint.FingerprintUtils.VariantContextSet

All Implemented Interfaces:
  `Serializable`, `Cloneable`, `Iterable<htsjdk.variant.variantcontext.VariantContext>`, `Collection<htsjdk.variant.variantcontext.VariantContext>`, `NavigableSet<htsjdk.variant.variantcontext.VariantContext>`, `Set<htsjdk.variant.variantcontext.VariantContext>`, `SortedSet<htsjdk.variant.variantcontext.VariantContext>`

Enclosing class:
  FingerprintUtils

public static class FingerprintUtils.VariantContextSet extends TreeSet<htsjdk.variant.variantcontext.VariantContext>
A class that holds VariantContexts sorted by genomic position

See Also:
  - Serialized Form

## Method Summary

### Methods inherited from class java.util.TreeSet

`add, addAll, ceiling, clear, clone, comparator, contains, descendingIterator, descendingSet, first, floor, headSet, headSet, higher, isEmpty, iterator, last, lower, pollFirst, pollLast, remove, size, spliterator, subSet, subSet, tailSet, tailSet`

### Methods inherited from class java.util.AbstractSet

`equals, hashCode, removeAll`

### Methods inherited from class java.util.AbstractCollection

`containsAll, retainAll, toArray, toArray, toString`

### Methods inherited from class java.lang.Object

`finalize, getClass, notify, notifyAll, wait, wait, wait`

### Methods inherited from interface java.util.Collection

`parallelStream, removeIf, stream, toArray`

### Methods inherited from interface java.lang.Iterable

`forEach`

### Methods inherited from interface java.util.Set

`containsAll, equals, hashCode, removeAll, retainAll, toArray, toArray`