# Hierarchy For Package picard.fingerprint

Package Hierarchies:

- All Packages

## Class Hierarchy

- java.lang.Object
  - java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    - java.util.TreeMap<K,V> (implements java.lang.Cloneable, java.util.NavigableMap<K,V>, java.io.Serializable)
      - picard.fingerprint.Fingerprint
  - picard.cmdline.CommandLineProgram
    - picard.fingerprint.CheckFingerprint
    - picard.fingerprint.CrosscheckReadGroupFingerprints
  - picard.fingerprint.FingerprintChecker
  - picard.fingerprint.FingerprintResults
  - picard.fingerprint.GenotypeReader
  - picard.fingerprint.GenotypeReader.VariantIterator (implements htsjdk.samtools.util.CloseableIterator<T>)
  - picard.fingerprint.HaplotypeBlock (implements java.lang.Comparable<T>)
  - picard.fingerprint.HaplotypeMap
  - picard.fingerprint.HaplotypeProbabilities
    - picard.fingerprint.HaplotypeProbabilitiesFromGenotype
    - picard.fingerprint.HaplotypeProbabilitiesFromGenotypeLikelihoods
    - picard.fingerprint.HaplotypeProbabilitiesFromSequence
      - picard.fingerprint.HaplotypeProbabilitiesFromContaminatorSequence
    - picard.fingerprint.HaplotypeProbabilityOfNormalGivenTumor
  - picard.fingerprint.MatchResults (implements java.lang.Comparable<T>)
  - picard.fingerprint.Snp (implements java.lang.Comparable<T>)

## Enum Hierarchy

- java.lang.Object
  - java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    - picard.fingerprint.DiploidGenotype
    - picard.fingerprint.DiploidHaplotype
    - picard.fingerprint.HaplotypeProbabilities.Genotype