phyml (3:3.3.20250515-2) unstable; urgency=medium

  [ Andreas Tille ]
  * d/copyright: Remove old FSF address
  * No build on i386 in Salsa CI

  [ Étienne Mollier ]
  * filter-sse3-intrinsics.patch: fix build failure on arm64.
  * d/control: restore buildability on 32-bit.
    The architecture-is-64bit is going to require coordination with all
    reverse dependencies.  For now let's restore 32-bit at these platforms
    look in working conditions.
  * d/control: move arm64 to mpich back-end.
    The openmpi back-end currently raises prte errors on autopkgtest.
    mpich is working fine for now.  This is probably symptomatic of an
    issue somewhere, but let's try first focus on getting phyml and
    reverse dependencies to migrate to testing again.
  * d/control: drop redundant Priority: optional.
  * d/control: drop redundant Rules-Requires-Root: no.
  * d/control: declare compliance to standards version 4.7.3.

  [ Helmut Grohne ]
  * cross.patch: new: Use MPI_C to enable cross building.
    This patch was initially proposed to resolve #1106652.

 -- Étienne Mollier <emollier@debian.org>  Sun, 01 Feb 2026 16:33:19 +0100

phyml (3:3.3.20250515-1) unstable; urgency=medium

  * Restrict to 64 bit architectures only by Build-Depending
    architecture-is-64-bit
    Closes: #1106652
  * d/watch: version=5
  * New upstream version
  * Standards-Version: 4.7.2 (routine-update)
  * Work around broken clean target

 -- Andreas Tille <tille@debian.org>  Sat, 06 Dec 2025 23:08:00 +0100

phyml (3:3.3.20220408-4) unstable; urgency=medium

  * d/p/series: disable cross.patch.
    The cross compilation procedure relies on mpi-c.pc to operate
    properly, but mpich misses it for the moment.
  * d/control: migrate to mpi-default-*. (Closes: #1086912)
  * d/control: declare compliance to standards version 4.7.0.
  * d/control: migrate to pkgconf.
  * d/patches/*: normalise header, notably Last-Update format.

 -- Étienne Mollier <emollier@debian.org>  Sat, 09 Nov 2024 19:50:59 +0100

phyml (3:3.3.20220408-3) unstable; urgency=medium

  * d/watch: move to git tag scanning; fixes uscan following github changes.

 -- Étienne Mollier <emollier@debian.org>  Wed, 26 Oct 2022 19:56:40 +0200

phyml (3:3.3.20220408-2) unstable; urgency=medium

  * Team upload.
  * Bump Standards-Version to 4.6.1 (no changes needed)
  * Do not run autopkgtests on armel (Closes: #1016941)

 -- Nilesh Patra <nilesh@debian.org>  Sat, 13 Aug 2022 01:19:11 +0530

phyml (3:3.3.20220408-1) unstable; urgency=medium

  * New upstream version
  * Refresh no-configure-ac-date.patch.
  * Refresh fix_declaration_of_temp.patch.
  * Refresh filter-sse3-intrinsics.patch.
  * Refresh typos.patch.

 -- Étienne Mollier <emollier@debian.org>  Sun, 08 May 2022 16:41:07 +0200

phyml (3:3.3.20211231-1) unstable; urgency=medium

  * New upstream version
  * Delete nodup-am-init-automake.patch: applied upstream.
  * Delete no-stdc++.patch: patched code section disappeared.
  * typos.patch: fix new typo.
  * Refresh most other patches.
  * d/copyright:
      - mention doc/naturemag.bst, under LaTeX Project Public License 1 or
        more.
      - update copyright year

 -- Étienne Mollier <emollier@debian.org>  Fri, 11 Feb 2022 17:08:37 +0100

phyml (3:3.3.20211021-1) unstable; urgency=medium

  * New upstream version.
  * Refresh most patches.
  * Add apply-cflags.patch: ensure standard Debian CFLAGS are propagated
    throughout the build process.
  * Add filter-sse3-intrinsics.patch: fixes FTBFS when built with -msse but
    without -msse3, as the codebase also now includes SSE3 instructions;
    however this means that SSE acceleration is thus now disabled on amd64.
  * Add apply-ldflags.patch: ensure standard Debian LDFLAGS are propagated
    throughout the build process for proper hardening.
  * d/rules: autoconfigure with --enable-phyml-mpi, replacing --enable-mpi.
  * d/rules: fix permissions of example files nucleic and proteic.
  * d/{links,phyml.1}: also provide phyml-mpi manual page.
  * d/control: add myself to Uploaders.
  * d/copyright: bump project to GPL-3 and document the file src/mxml.h
  * d/copyright: update copyright entry of package maintenance

 -- Étienne Mollier <emollier@debian.org>  Fri, 19 Nov 2021 00:22:37 +0100

phyml (3:3.3.20200621-3) unstable; urgency=medium

  * Team upload.
  * Add nodup-am-init-automake.patch (Closes: #998477)

 -- Étienne Mollier <emollier@debian.org>  Thu, 04 Nov 2021 23:15:13 +0100

phyml (3:3.3.20200621-2) unstable; urgency=medium

  * Fix watchfile to detect new versions on github
  * Standards-Version: 4.6.0 (routine-update)

 -- Andreas Tille <tille@debian.org>  Wed, 06 Oct 2021 17:30:05 +0200

phyml (3:3.3.20200621-1) unstable; urgency=medium

  * Team upload
  * New upstream version 3.3.20200621 (Closes: #957679)
  * Standards-Version: 4.5.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
    Repository-Browse.

 -- Shayan Doust <hello@shayandoust.me>  Wed, 22 Jul 2020 16:25:36 +0000

phyml (3:3.3.20190909-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.4.1
  * Reported autogenerated files in archive to upstream
    (https://github.com/stephaneguindon/phyml/issues/113)

 -- Steffen Moeller <moeller@debian.org>  Wed, 06 Nov 2019 21:46:04 +0100

phyml (3:3.3.20190321-2) unstable; urgency=medium

  * Fix autopkgtest
    Closes: #935598
  * Secure URI in copyright format
  * Remove trailing whitespace in debian/changelog
  * Remove obsolete fields Name, Contact from debian/upstream/metadata.

 -- Andreas Tille <tille@debian.org>  Sat, 24 Aug 2019 16:08:44 +0200

phyml (3:3.3.20190321-1) unstable; urgency=medium

  * New upstream version
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * Do not run dh_dwz

 -- Andreas Tille <tille@debian.org>  Thu, 01 Aug 2019 22:05:12 +0200

# Older entries have been removed from this changelog.
# To read the complete changelog use `apt changelog phyml`.
