Actual source code: ex5.c

      1: static char help[] = "Demonstrates using the PetscBag Object\n\n";

      3: #include <petscsys.h>
      4: #include <petscbag.h>
      5: #include <petscviewer.h>

      7: /*
      8:   Enum variables can be stored in a bag but require a string array
      9:   to name their fields.  The fourth entry in this example is the name
     10:   of the enum, the fifth is the prefix (none in this case), and the last
     11:   entry is the null string.
     12: */
     13: typedef enum {
     14:   THIS      = 0,
     15:   THAT      = 1,
     16:   THE_OTHER = 2
     17: } YourChoice;
     18: const char *EnumeratedChoices[] = {"THIS", "THAT", "THE_OTHER", "EnumeratedChoices", "", 0};

     20: /*
     21:   Data structures can be used in a bag as long as they
     22:   are declared in the bag with a variable, not with a pointer.
     23: */
     24: typedef struct {
     25:   PetscReal x1, x2;
     26: } TwoVec;

     28: /*
     29:   Define a C struct that will contain my program's parameters.

     31:   A PETSc bag is merely a representation of a C struct that can be printed, saved to a file and loaded from a file.
     32: */
     33: typedef struct {
     34:   PetscScalar   W;
     35:   PetscReal     rho;
     36:   TwoVec        pos;
     37:   PetscInt      Ii;
     38:   PetscInt      iarray[3];
     39:   PetscReal     rarray[2];
     40:   PetscBool     T;
     41:   PetscBool     Tarray[3];
     42:   PetscDataType dt;
     43:   char          filename[PETSC_MAX_PATH_LEN];
     44:   YourChoice    which;
     45: } Parameter;

     47: int main(int argc, char **argv)
     48: {
     49:   PetscBag    bag;
     50:   Parameter  *params;
     51:   PetscViewer viewer;
     52:   PetscBool   flg;
     53:   char        filename[PETSC_MAX_PATH_LEN] = "binaryoutput";

     55:   /*
     56:     Every PETSc routine should begin with the PetscInitialize() routine.
     57:     argc, argv - These command line arguments are taken to extract the options
     58:                  supplied to PETSc and options supplied to MPI.
     59:     help       - When PETSc executable is invoked with the option -help,
     60:                  it prints the various options that can be applied at
     61:                  runtime.  The user can use the "help" variable place
     62:                  additional help messages in this printout.
     63:   */
     64:   PetscFunctionBeginUser;
     65:   PetscCall(PetscInitialize(&argc, &argv, NULL, help));

     67:   /* Create an empty bag */
     68:   PetscCall(PetscBagCreate(PETSC_COMM_WORLD, sizeof(Parameter), &bag));
     69:   PetscCall(PetscBagGetData(bag, &params));

     71:   /* register variables, defaults, names, help strings */
     72:   PetscCall(PetscBagSetName(bag, "ParameterBag", "contains parameters for simulations of top-secret, dangerous physics"));
     73:   PetscCall(PetscBagSetOptionsPrefix(bag, "pbag_"));
     74:   PetscCall(PetscBagRegisterString(bag, &params->filename, PETSC_MAX_PATH_LEN, "myfile", "filename", "Name of secret file"));
     75:   PetscCall(PetscBagRegisterReal(bag, &params->rho, 3.0, "rho", "Density, kg/m^3"));
     76:   PetscCall(PetscBagRegisterScalar(bag, &params->W, 5.0, "W", "Vertical velocity, m/sec"));
     77:   PetscCall(PetscBagRegisterInt(bag, &params->Ii, 2, "modes_x", "Number of modes in x-direction"));

     79:   params->iarray[0] = 1;
     80:   params->iarray[1] = 2;
     81:   params->iarray[2] = 3;

     83:   PetscCall(PetscBagRegisterIntArray(bag, &params->iarray, 3, "int_array", "Int array with 3 locations"));

     85:   params->rarray[0] = -1.0;
     86:   params->rarray[1] = -2.0;

     88:   PetscCall(PetscBagRegisterRealArray(bag, &params->rarray, 2, "real_array", "Real array with 2 locations"));
     89:   PetscCall(PetscBagRegisterBool(bag, &params->T, PETSC_FALSE, "do_output", "Write output file (yes/no)"));
     90:   PetscCall(PetscBagRegisterBoolArray(bag, &params->Tarray, 3, "bool_array", "Bool array with 3 locations"));
     91:   PetscCall(PetscBagRegisterEnum(bag, &params->dt, PetscDataTypes, (PetscEnum)PETSC_INT, "dt", "meaningless datatype"));
     92:   PetscCall(PetscBagRegisterReal(bag, &params->pos.x1, 1.0, "x1", "x position"));
     93:   PetscCall(PetscBagRegisterReal(bag, &params->pos.x2, 1.9, "x2", "y position"));
     94:   PetscCall(PetscBagRegisterEnum(bag, &params->which, EnumeratedChoices, (PetscEnum)THAT, "choose", "Express yourself by choosing among enumerated things"));

     96:   /* This option allows loading user-provided PetscBag */
     97:   PetscCall(PetscOptionsGetString(NULL, NULL, "-f", filename, sizeof(filename), &flg));
     98:   if (!flg) {
     99:     /* write bag to stdio & binary file */
    100:     PetscCall(PetscBagView(bag, PETSC_VIEWER_STDOUT_WORLD));
    101:     PetscCall(PetscViewerBinaryOpen(PETSC_COMM_WORLD, filename, FILE_MODE_WRITE, &viewer));
    102:     PetscCall(PetscBagView(bag, viewer));
    103:     PetscCall(PetscViewerDestroy(&viewer));
    104:   }

    106:   PetscCall(PetscMemzero(params, sizeof(Parameter)));

    108:   /* load bag from file & write to stdio */
    109:   PetscCall(PetscViewerBinaryOpen(PETSC_COMM_WORLD, filename, FILE_MODE_READ, &viewer));
    110:   PetscCall(PetscBagLoad(viewer, bag));
    111:   PetscCall(PetscViewerDestroy(&viewer));
    112:   PetscCall(PetscBagSetFromOptions(bag));
    113:   PetscCall(PetscBagView(bag, PETSC_VIEWER_STDOUT_WORLD));

    115:   /* reuse the parameter struct */
    116:   PetscCall(PetscBagGetData(bag, &params));
    117:   PetscCall(PetscPrintf(PETSC_COMM_WORLD, "The value of rho after loading is: %f\n", (double)params->rho));

    119:   /* clean up and exit */
    120:   PetscCall(PetscBagDestroy(&bag));
    121:   PetscCall(PetscFinalize());
    122:   return 0;
    123: }

    125: /*TEST

    127:    test:
    128:       args: -pbag_rho 44 -pbag_do_output true
    129:       requires: !complex

    131:    test:
    132:       suffix: yaml
    133:       requires: !complex
    134:       args: -options_file bag.yml -options_view
    135:       filter: grep -E -v "(options_view)"
    136:       localrunfiles: bag.yml

    138: TEST*/