Actual source code: ex45.c

      1: /*
      2: Laplacian in 3D. Modeled by the partial differential equation

      4:    - Laplacian u = 1,0 < x,y,z < 1,

      6: with boundary conditions

      8:    u = 1 for x = 0, x = 1, y = 0, y = 1, z = 0, z = 1.

     10:    This uses multigrid to solve the linear system

     12:    See src/snes/tutorials/ex50.c

     14:    Can also be run with -pc_type exotic -ksp_type fgmres

     16: */

     18: static char help[] = "Solves 3D Laplacian using multigrid.\n\n";

     20: #include <petscksp.h>
     21: #include <petscdm.h>
     22: #include <petscdmda.h>

     24: PetscLogEvent setvalues, usertime;

     26: extern PetscErrorCode ComputeMatrix(KSP, Mat, Mat, void *);
     27: extern PetscErrorCode ComputeRHS(KSP, Vec, void *);
     28: extern PetscErrorCode ComputeInitialGuess(KSP, Vec, void *);

     30: int main(int argc, char **argv)
     31: {
     32:   KSP       ksp;
     33:   PetscReal norm;
     34:   DM        da;
     35:   Vec       x, b, r;
     36:   Mat       A;

     38:   PetscFunctionBeginUser;
     39:   PetscCall(PetscInitialize(&argc, &argv, NULL, help));
     40:   PetscCall(PetscLogEventRegister("Set values", MAT_CLASSID, &setvalues));
     41:   PetscCall(PetscLogEventRegister("User time", MAT_CLASSID, &usertime));
     42:   PetscCallMPI(MPI_Barrier(PETSC_COMM_WORLD));
     43:   PetscCall(PetscLogEventBegin(usertime, NULL, NULL, NULL, NULL));

     45:   PetscCall(KSPCreate(PETSC_COMM_WORLD, &ksp));
     46:   PetscCall(DMDACreate3d(PETSC_COMM_WORLD, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, DMDA_STENCIL_STAR, 7, 7, 7, PETSC_DECIDE, PETSC_DECIDE, PETSC_DECIDE, 1, 1, 0, 0, 0, &da));
     47:   PetscCall(DMSetFromOptions(da));
     48:   PetscCall(DMSetUp(da));
     49:   PetscCall(KSPSetDM(ksp, da));
     50:   PetscCall(KSPSetComputeInitialGuess(ksp, ComputeInitialGuess, NULL));
     51:   PetscCall(KSPSetComputeRHS(ksp, ComputeRHS, NULL));
     52:   PetscCall(KSPSetComputeOperators(ksp, ComputeMatrix, NULL));
     53:   PetscCall(DMDestroy(&da));

     55:   PetscCall(KSPSetFromOptions(ksp));
     56:   PetscCall(KSPSolve(ksp, NULL, NULL));
     57:   PetscCall(KSPGetSolution(ksp, &x));
     58:   PetscCall(KSPGetRhs(ksp, &b));
     59:   PetscCall(VecDuplicate(b, &r));
     60:   PetscCall(KSPGetOperators(ksp, &A, NULL));

     62:   PetscCall(MatMult(A, x, r));
     63:   PetscCall(VecAXPY(r, -1.0, b));
     64:   PetscCall(VecNorm(r, NORM_2, &norm));
     65:   PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Residual norm %g\n", (double)norm));

     67:   PetscCall(VecDestroy(&r));
     68:   PetscCall(KSPDestroy(&ksp));
     69:   PetscCall(PetscLogEventEnd(usertime, NULL, NULL, NULL, NULL));
     70:   PetscCall(PetscFinalize());
     71:   return 0;
     72: }

     74: PetscErrorCode ComputeRHS(KSP ksp, Vec b, void *ctx)
     75: {
     76:   PetscInt       i, j, k, mx, my, mz, xm, ym, zm, xs, ys, zs;
     77:   DM             dm;
     78:   PetscScalar    Hx, Hy, Hz, HxHydHz, HyHzdHx, HxHzdHy;
     79:   PetscScalar ***barray;

     81:   PetscFunctionBeginUser;
     82:   PetscCall(PetscLogEventBegin(setvalues, NULL, NULL, NULL, NULL));
     83:   PetscCall(KSPGetDM(ksp, &dm));
     84:   PetscCall(DMDAGetInfo(dm, 0, &mx, &my, &mz, 0, 0, 0, 0, 0, 0, 0, 0, 0));
     85:   Hx      = 1.0 / (PetscReal)(mx - 1);
     86:   Hy      = 1.0 / (PetscReal)(my - 1);
     87:   Hz      = 1.0 / (PetscReal)(mz - 1);
     88:   HxHydHz = Hx * Hy / Hz;
     89:   HxHzdHy = Hx * Hz / Hy;
     90:   HyHzdHx = Hy * Hz / Hx;
     91:   PetscCall(DMDAGetCorners(dm, &xs, &ys, &zs, &xm, &ym, &zm));
     92:   PetscCall(DMDAVecGetArray(dm, b, &barray));

     94:   for (k = zs; k < zs + zm; k++) {
     95:     for (j = ys; j < ys + ym; j++) {
     96:       for (i = xs; i < xs + xm; i++) {
     97:         if (i == 0 || j == 0 || k == 0 || i == mx - 1 || j == my - 1 || k == mz - 1) {
     98:           barray[k][j][i] = 2.0 * (HxHydHz + HxHzdHy + HyHzdHx);
     99:         } else {
    100:           barray[k][j][i] = Hx * Hy * Hz;
    101:         }
    102:       }
    103:     }
    104:   }
    105:   PetscCall(DMDAVecRestoreArray(dm, b, &barray));
    106:   PetscCall(PetscLogEventEnd(setvalues, NULL, NULL, NULL, NULL));
    107:   PetscFunctionReturn(PETSC_SUCCESS);
    108: }

    110: PetscErrorCode ComputeInitialGuess(KSP ksp, Vec b, void *ctx)
    111: {
    112:   PetscFunctionBeginUser;
    113:   PetscCall(VecSet(b, 0));
    114:   PetscFunctionReturn(PETSC_SUCCESS);
    115: }

    117: PetscErrorCode ComputeMatrix(KSP ksp, Mat jac, Mat B, void *ctx)
    118: {
    119:   DM          da;
    120:   PetscInt    i, j, k, mx, my, mz, xm, ym, zm, xs, ys, zs;
    121:   PetscScalar v[7], Hx, Hy, Hz, HxHydHz, HyHzdHx, HxHzdHy;
    122:   MatStencil  row, col[7];

    124:   PetscFunctionBeginUser;
    125:   PetscCall(PetscLogEventBegin(setvalues, NULL, NULL, NULL, NULL));
    126:   PetscCall(KSPGetDM(ksp, &da));
    127:   PetscCall(DMDAGetInfo(da, 0, &mx, &my, &mz, 0, 0, 0, 0, 0, 0, 0, 0, 0));
    128:   Hx      = 1.0 / (PetscReal)(mx - 1);
    129:   Hy      = 1.0 / (PetscReal)(my - 1);
    130:   Hz      = 1.0 / (PetscReal)(mz - 1);
    131:   HxHydHz = Hx * Hy / Hz;
    132:   HxHzdHy = Hx * Hz / Hy;
    133:   HyHzdHx = Hy * Hz / Hx;
    134:   PetscCall(DMDAGetCorners(da, &xs, &ys, &zs, &xm, &ym, &zm));

    136:   for (k = zs; k < zs + zm; k++) {
    137:     for (j = ys; j < ys + ym; j++) {
    138:       for (i = xs; i < xs + xm; i++) {
    139:         row.i = i;
    140:         row.j = j;
    141:         row.k = k;
    142:         if (i == 0 || j == 0 || k == 0 || i == mx - 1 || j == my - 1 || k == mz - 1) {
    143:           v[0] = 2.0 * (HxHydHz + HxHzdHy + HyHzdHx);
    144:           PetscCall(MatSetValuesStencil(B, 1, &row, 1, &row, v, INSERT_VALUES));
    145:         } else {
    146:           v[0]     = -HxHydHz;
    147:           col[0].i = i;
    148:           col[0].j = j;
    149:           col[0].k = k - 1;
    150:           v[1]     = -HxHzdHy;
    151:           col[1].i = i;
    152:           col[1].j = j - 1;
    153:           col[1].k = k;
    154:           v[2]     = -HyHzdHx;
    155:           col[2].i = i - 1;
    156:           col[2].j = j;
    157:           col[2].k = k;
    158:           v[3]     = 2.0 * (HxHydHz + HxHzdHy + HyHzdHx);
    159:           col[3].i = row.i;
    160:           col[3].j = row.j;
    161:           col[3].k = row.k;
    162:           v[4]     = -HyHzdHx;
    163:           col[4].i = i + 1;
    164:           col[4].j = j;
    165:           col[4].k = k;
    166:           v[5]     = -HxHzdHy;
    167:           col[5].i = i;
    168:           col[5].j = j + 1;
    169:           col[5].k = k;
    170:           v[6]     = -HxHydHz;
    171:           col[6].i = i;
    172:           col[6].j = j;
    173:           col[6].k = k + 1;
    174:           PetscCall(MatSetValuesStencil(B, 1, &row, 7, col, v, INSERT_VALUES));
    175:         }
    176:       }
    177:     }
    178:   }
    179:   PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
    180:   PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
    181:   PetscCall(PetscLogEventEnd(setvalues, NULL, NULL, NULL, NULL));
    182:   PetscFunctionReturn(PETSC_SUCCESS);
    183: }

    185: /*TEST

    187:    test:
    188:       nsize: 4
    189:       args: -pc_type exotic -ksp_monitor_short -ksp_type fgmres -mg_levels_ksp_type gmres -mg_levels_ksp_max_it 1 -mg_levels_pc_type bjacobi
    190:       output_file: output/ex45_1.out

    192:    test:
    193:       suffix: 2
    194:       nsize: 4
    195:       args: -ksp_monitor_short -da_grid_x 21 -da_grid_y 21 -da_grid_z 21 -pc_type mg -pc_mg_levels 3 -mg_levels_ksp_type richardson -mg_levels_ksp_max_it 1 -mg_levels_pc_type bjacobi

    197:    test:
    198:       suffix: telescope
    199:       nsize: 4
    200:       args: -ksp_type fgmres -ksp_monitor_short -pc_type mg -mg_levels_ksp_type richardson -mg_levels_pc_type jacobi -pc_mg_levels 2 -da_grid_x 65 -da_grid_y 65 -da_grid_z 65 -mg_coarse_pc_type telescope -mg_coarse_pc_telescope_ignore_kspcomputeoperators -mg_coarse_pc_telescope_reduction_factor 4 -mg_coarse_telescope_pc_type mg -mg_coarse_telescope_pc_mg_galerkin pmat -mg_coarse_telescope_pc_mg_levels 3 -mg_coarse_telescope_mg_levels_ksp_type richardson -mg_coarse_telescope_mg_levels_pc_type jacobi -mg_levels_ksp_type richardson -mg_coarse_telescope_mg_levels_ksp_type richardson -ksp_rtol 1.0e-4

    202:    test:
    203:       suffix: telescope_2
    204:       nsize: 4
    205:       args: -ksp_type fgmres -ksp_monitor_short -pc_type mg -mg_levels_ksp_type richardson -mg_levels_pc_type jacobi -pc_mg_levels 2 -da_grid_x 65 -da_grid_y 65 -da_grid_z 65 -mg_coarse_pc_type telescope -mg_coarse_pc_telescope_reduction_factor 2 -mg_coarse_telescope_pc_type mg -mg_coarse_telescope_pc_mg_galerkin pmat -mg_coarse_telescope_pc_mg_levels 3 -mg_coarse_telescope_mg_levels_ksp_type richardson -mg_coarse_telescope_mg_levels_pc_type jacobi -mg_levels_ksp_type richardson -mg_coarse_telescope_mg_levels_ksp_type richardson -ksp_rtol 1.0e-4

    207: TEST*/