Actual source code: ex12.c

      2: static char help[] = "Solves a linear system in parallel with KSP,\n\
      3: demonstrating how to register a new preconditioner (PC) type.\n\
      4: Input parameters include:\n\
      5:   -m <mesh_x>       : number of mesh points in x-direction\n\
      6:   -n <mesh_y>       : number of mesh points in y-direction\n\n";

      8: /*T
      9:    Concepts: KSP^solving a system of linear equations
     10:    Concepts: KSP^Laplacian, 2d
     11:    Concepts: PC^registering preconditioners
     12:    Processors: n
     13: T*/

     15: /*
     16:    Demonstrates registering a new preconditioner (PC) type.

     18:    To register a PC type whose code is linked into the executable,
     19:    use PCRegister(). To register a PC type in a dynamic library use PCRegister()

     21:    Also provide the prototype for your PCCreate_XXX() function. In
     22:    this example we use the PETSc implementation of the Jacobi method,
     23:    PCCreate_Jacobi() just as an example.

     25:    See the file src/ksp/pc/impls/jacobi/jacobi.c for details on how to
     26:    write a new PC component.

     28:    See the manual page PCRegister() for details on how to register a method.
     29: */

     31: /*
     32:   Include "petscksp.h" so that we can use KSP solvers.  Note that this file
     33:   automatically includes:
     34:      petscsys.h       - base PETSc routines   petscvec.h - vectors
     35:      petscmat.h - matrices
     36:      petscis.h     - index sets            petscksp.h - Krylov subspace methods
     37:      petscviewer.h - viewers               petscpc.h  - preconditioners
     38: */
     39: #include <petscksp.h>

     41: PETSC_EXTERN PetscErrorCode PCCreate_Jacobi(PC);

     43: int main(int argc,char **args)
     44: {
     45:   Vec            x,b,u;  /* approx solution, RHS, exact solution */
     46:   Mat            A;        /* linear system matrix */
     47:   KSP            ksp;     /* linear solver context */
     48:   PetscReal      norm;     /* norm of solution error */
     49:   PetscInt       i,j,Ii,J,Istart,Iend,m = 8,n = 7,its;
     51:   PetscScalar    v,one = 1.0;
     52:   PC             pc;      /* preconditioner context */

     54:   PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr;
     55:   PetscOptionsGetInt(NULL,NULL,"-m",&m,NULL);
     56:   PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL);

     58:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
     59:          Compute the matrix and right-hand-side vector that define
     60:          the linear system, Ax = b.
     61:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
     62:   /*
     63:      Create parallel matrix, specifying only its global dimensions.
     64:      When using MatCreate(), the matrix format can be specified at
     65:      runtime. Also, the parallel partitioning of the matrix can be
     66:      determined by PETSc at runtime.
     67:   */
     68:   MatCreate(PETSC_COMM_WORLD,&A);
     69:   MatSetSizes(A,PETSC_DECIDE,PETSC_DECIDE,m*n,m*n);
     70:   MatSetFromOptions(A);
     71:   MatSetUp(A);

     73:   /*
     74:      Currently, all PETSc parallel matrix formats are partitioned by
     75:      contiguous chunks of rows across the processors.  Determine which
     76:      rows of the matrix are locally owned.
     77:   */
     78:   MatGetOwnershipRange(A,&Istart,&Iend);

     80:   /*
     81:      Set matrix elements for the 2-D, five-point stencil in parallel.
     82:       - Each processor needs to insert only elements that it owns
     83:         locally (but any non-local elements will be sent to the
     84:         appropriate processor during matrix assembly).
     85:       - Always specify global rows and columns of matrix entries.
     86:    */
     87:   for (Ii=Istart; Ii<Iend; Ii++) {
     88:     v = -1.0; i = Ii/n; j = Ii - i*n;
     89:     if (i>0)   {J = Ii - n; MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);}
     90:     if (i<m-1) {J = Ii + n; MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);}
     91:     if (j>0)   {J = Ii - 1; MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);}
     92:     if (j<n-1) {J = Ii + 1; MatSetValues(A,1,&Ii,1,&J,&v,INSERT_VALUES);}
     93:     v = 4.0; MatSetValues(A,1,&Ii,1,&Ii,&v,INSERT_VALUES);
     94:   }

     96:   /*
     97:      Assemble matrix, using the 2-step process:
     98:        MatAssemblyBegin(), MatAssemblyEnd()
     99:      Computations can be done while messages are in transition
    100:      by placing code between these two statements.
    101:   */
    102:   MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);
    103:   MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);

    105:   /*
    106:      Create parallel vectors.
    107:       - When using VecCreate(), VecSetSizes() and VecSetFromOptions(),
    108:       we specify only the vector's global
    109:         dimension; the parallel partitioning is determined at runtime.
    110:       - When solving a linear system, the vectors and matrices MUST
    111:         be partitioned accordingly.  PETSc automatically generates
    112:         appropriately partitioned matrices and vectors when MatCreate()
    113:         and VecCreate() are used with the same communicator.
    114:       - Note: We form 1 vector from scratch and then duplicate as needed.
    115:   */
    116:   VecCreate(PETSC_COMM_WORLD,&u);
    117:   VecSetSizes(u,PETSC_DECIDE,m*n);
    118:   VecSetFromOptions(u);
    119:   VecDuplicate(u,&b);
    120:   VecDuplicate(b,&x);

    122:   /*
    123:      Set exact solution; then compute right-hand-side vector.
    124:      Use an exact solution of a vector with all elements of 1.0;
    125:   */
    126:   VecSet(u,one);
    127:   MatMult(A,u,b);

    129:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    130:                 Create the linear solver and set various options
    131:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

    133:   /*
    134:      Create linear solver context
    135:   */
    136:   KSPCreate(PETSC_COMM_WORLD,&ksp);

    138:   /*
    139:      Set operators. Here the matrix that defines the linear system
    140:      also serves as the preconditioning matrix.
    141:   */
    142:   KSPSetOperators(ksp,A,A);

    144:   /*
    145:        First register a new PC type with the command PCRegister()
    146:   */
    147:   PCRegister("ourjacobi",PCCreate_Jacobi);

    149:   /*
    150:      Set the PC type to be the new method
    151:   */
    152:   KSPGetPC(ksp,&pc);
    153:   PCSetType(pc,"ourjacobi");

    155:   /*
    156:     Set runtime options, e.g.,
    157:         -ksp_type <type> -pc_type <type> -ksp_monitor -ksp_rtol <rtol>
    158:     These options will override those specified above as long as
    159:     KSPSetFromOptions() is called _after_ any other customization
    160:     routines.
    161:   */
    162:   KSPSetFromOptions(ksp);

    164:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    165:                       Solve the linear system
    166:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

    168:   KSPSolve(ksp,b,x);

    170:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    171:                       Check solution and clean up
    172:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

    174:   /*
    175:      Check the error
    176:   */
    177:   VecAXPY(x,-1.0,u);
    178:   VecNorm(x,NORM_2,&norm);
    179:   KSPGetIterationNumber(ksp,&its);

    181:   /*
    182:      Print convergence information.  PetscPrintf() produces a single
    183:      print statement from all processes that share a communicator.
    184:   */
    185:   PetscPrintf(PETSC_COMM_WORLD,"Norm of error %g iterations %D\n",(double)norm,its);

    187:   /*
    188:      Free work space.  All PETSc objects should be destroyed when they
    189:      are no longer needed.
    190:   */
    191:   KSPDestroy(&ksp);
    192:   VecDestroy(&u);  VecDestroy(&x);
    193:   VecDestroy(&b);  MatDestroy(&A);

    195:   /*
    196:      Always call PetscFinalize() before exiting a program.  This routine
    197:        - finalizes the PETSc libraries as well as MPI
    198:        - provides summary and diagnostic information if certain runtime
    199:          options are chosen (e.g., -log_view).
    200:   */
    201:   PetscFinalize();
    202:   return ierr;
    203: }

    206: /*TEST

    208:    test:
    209:       args: -ksp_gmres_cgs_refinement_type refine_always

    211: TEST*/