pbalign.tools package
=====================

Submodules
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pbalign.tools.createChemistryHeader module
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.. automodule:: pbalign.tools.createChemistryHeader
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pbalign.tools.extractUnmappedSubreads module
--------------------------------------------

.. automodule:: pbalign.tools.extractUnmappedSubreads
    :members:
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pbalign.tools.loadChemistry module
----------------------------------

.. automodule:: pbalign.tools.loadChemistry
    :members:
    :undoc-members:
    :show-inheritance:

pbalign.tools.mask_aligned_reads module
---------------------------------------

.. automodule:: pbalign.tools.mask_aligned_reads
    :members:
    :undoc-members:
    :show-inheritance:


Module contents
---------------

.. automodule:: pbalign.tools
    :members:
    :undoc-members:
    :show-inheritance:
