## pairs format v1.0.0
#shape: upper triangle
#genome_assembly: unknown
#samheader: @SQ	SN:chr1	LN:100
#samheader: @SQ	SN:chr2	LN:100
#samheader: @SQ	SN:chr3	LN:100
#samheader: @PG	ID:bwa	PN:bwa	VN:0.7.15-r1140	CL:bwa mem -SP /path/ucsc.hg19.fasta.gz /path/1.fastq.gz /path/2.fastq.gz
#chromosomes: chr2 chr3 chr1
#chromsize: chr2 100
#chromsize: chr3 100
#chromsize: chr1 100
#columns: readID chrom1 pos1 chrom2 pos2 strand1 strand2 pair_type sam1 sam2
readid01	chr2	40	chr3	2	+	+	UU
readid02	chr1	6	chr1	9	+	+	UR
readid03	chr1	1	chr2	20	+	+	UU
readid04	chr1	50	chr1	1	+	+	UU
readid05	chr1	1	chr1	5	+	+	UU
readid06	chr1	20	chr1	30	+	+	UR
readid07	!	0	chr1	3	-	+	NU
readid08	!	0	chr1	3	-	+	MU
readid09	!	0	!	0	-	-	WW
