## pairs format v1.0.0
#shape: upper triangle
#genome_assembly: unknown
#samheader: @SQ SN:chr1 LN:10000
#samheader: @SQ SN:chr2 LN:10000
#samheader: @PG ID:bwa  PN:bwa  VN:0.7.15-r1140 CL:bwa mem -SP /path/ucsc.hg19.fasta.gz /path/1.fastq.gz /path/2.fastq.gz
#chromosomes: chr1 chr2
#chromsize: chr1 10000
#chromsize: chr2 10000
#columns: readID chrom1 pos1 chrom2 pos2 strand1 strand2 pair_type rfrag_test1 rfrag_test2
readid01	chr1	1	chr2	20	+	+	UU	0	0
readid02	chr1	100	chr2	20	-	+	UU	0	0
readid03	chr1	100	chr2	20	+	+	UU	0	0
readid04	chr1	499	chr2	20	+	+	UU	1	0
readid05	chr1	600	chr2	20	+	+	UU	2	0
readid06	chr1	1	chr2	200	+	+	UU	0	0
readid07	chr1	1	chr2	500	+	+	UU	0	1
readid08	chr1	10001	chr2	10001	+	+	UU	2	1
