## pairs format v1.0.0
#shape: upper triangle
#genome_assembly: unknown
#samheader: @SQ	SN:chr1	LN:100
#samheader: @SQ	SN:chr2	LN:100
#samheader: @SQ	SN:chr3	LN:100
#samheader: @PG	ID:bwa	PN:bwa	VN:0.7.15-r1140	CL:bwa mem -SP /path/ucsc.hg19.fasta.gz /path/1.fastq.gz /path/2.fastq.gz
#chromosomes: chr2 chr3 chr1
#columns: readID chrom1 pos1 chrom2 pos2 strand1 strand2 pair_type sam1 sam2
readid01	chr1	1	chr2	25	+	+	UU	readid01129chr1160101Mchr2250CGFFXS:i:0Yt:Z:UU	readid0165chr22560101Mchr110ATIIXS:i:0Yt:Z:UU
readid02	chr1	1	chr1	40	+	+	UU	readid02129chr1160101Mchr1400CGFFXS:i:0Yt:Z:UU	readid0265chr14060101Mchr110ATIIXS:i:0Yt:Z:UU
readid03	chr1	1	chr1	3	+	+	UR	readid03129chr1160101Mchr130CGFFXS:i:0Yt:Z:UR	readid0365chr1360101Mchr110ATIIXS:i:0Yt:Z:UR
readid04	!	0	chr1	3	-	+	NU	readid04129chr1160101Mchr130CGFFXS:i:0Yt:Z:NU	readid0465chr1360101Mchr110ATIIXS:i:0Yt:Z:NU
readid05	!	0	!	0	-	-	NN	readid05129chr1160101Mchr130CGFFXS:i:0Yt:Z:NN	readid0565chr1360101Mchr110ATIIXS:i:0Yt:Z:NN