Package: optimir
Version: 1.2-2build1
Architecture: all
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 7403
Depends: python3-biopython, python3-pysam, python3:any, bowtie2, cutadapt, samtools
Recommends: r-cran-gridextra, r-cran-ggplot2
Section: science
Priority: optional
Homepage: https://github.com/FlorianThibord/OptimiR
Description: Integrating genetic variations in miRNA alignment
 OptimiR is a miRSeq data alignment workflow. It integrates genetic information
 to assess the impact of variants on miRNA expression.
 .
 OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs,
 isomiRs and polymiRs from miRSeq data, & study the impact of genetic
 variations on polymiRs' expression.
