.. AUTO-GENERATED FILE -- DO NOT EDIT!

workflows.dmri.dipy.denoise
===========================


.. module:: nipype.workflows.dmri.dipy.denoise


.. _nipype.workflows.dmri.dipy.denoise.nlmeans_pipeline:

:func:`nlmeans_pipeline`
------------------------

`Link to code <file:///build/nipype-fj7ofr/nipype-1.0.0+git69-gdb2670326/nipype/workflows/dmri/dipy/denoise.py#L12>`__



Workflow that performs nlmeans denoising

Example
~~~~~~~

>>> from nipype.workflows.dmri.dipy.denoise import nlmeans_pipeline
>>> denoise = nlmeans_pipeline()
>>> denoise.inputs.inputnode.in_file = 'diffusion.nii'
>>> denoise.inputs.inputnode.in_mask = 'mask.nii'
>>> denoise.run() # doctest: +SKIP


Graph
~~~~~

.. graphviz::

	digraph Denoise{

	  label="Denoise";

	  Denoise_inputnode[label="inputnode (utility)"];

	  Denoise_NoiseMsk[label="NoiseMsk (utility)"];

	  Denoise_NLMeans[label="NLMeans (dipy)"];

	  Denoise_outputnode[label="outputnode (utility)"];

	  Denoise_inputnode -> Denoise_NoiseMsk;

	  Denoise_inputnode -> Denoise_NoiseMsk;

	  Denoise_inputnode -> Denoise_NLMeans;

	  Denoise_inputnode -> Denoise_NLMeans;

	  Denoise_NoiseMsk -> Denoise_NLMeans;

	  Denoise_NLMeans -> Denoise_outputnode;

	}


.. _nipype.workflows.dmri.dipy.denoise.bg_mask:

:func:`bg_mask`
---------------

`Link to code <file:///build/nipype-fj7ofr/nipype-1.0.0+git69-gdb2670326/nipype/workflows/dmri/dipy/denoise.py#L96>`__



Rough mask of background from brain masks


.. _nipype.workflows.dmri.dipy.denoise.csf_mask:

:func:`csf_mask`
----------------

`Link to code <file:///build/nipype-fj7ofr/nipype-1.0.0+git69-gdb2670326/nipype/workflows/dmri/dipy/denoise.py#L53>`__



Artesanal mask of csf in T2w-like images

