reconstruct_data_2d.c
/*
* Copyright (c) 2002, 2017 Jens Keiner, Stefan Kunis, Daniel Potts
*
* This program is free software; you can redistribute it and/or modify it under
* the terms of the GNU General Public License as published by the Free Software
* Foundation; either version 2 of the License, or (at your option) any later
* version.
*
* This program is distributed in the hope that it will be useful, but WITHOUT
* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
* FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
* details.
*
* You should have received a copy of the GNU General Public License along with
* this program; if not, write to the Free Software Foundation, Inc., 51
* Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/
#include <math.h>
#include <stdlib.h>
#include <complex.h>
#include "nfft3.h"
static void reconstruct(char* filename,int N,int M,int iteration, int weight)
{
int j,k,l; /* some variables */
double t0, t1;
double real,imag,t; /* to read the real and imag part of a complex number */
nfft_plan my_plan; /* plan for the two dimensional nfft */
solver_plan_complex my_iplan; /* plan for the two dimensional infft */
FILE* fin; /* input file */
FILE* fout_real; /* output file */
FILE* fout_imag; /* output file */
int my_N[2],my_n[2]; /* to init the nfft */
double epsilon=0.0000003; /* epsilon is a the break criterium for
the iteration */
unsigned infft_flags = CGNR | PRECOMPUTE_DAMP; /* flags for the infft*/
int m = 6;
double alpha = 2.0;
/* initialise my_plan */
my_N[0]=N; my_n[0]=ceil(N*alpha);
my_N[1]=N; my_n[1]=ceil(N*alpha);
nfft_init_guru(&my_plan, 2, my_N, M, my_n, m, PRE_PHI_HUT| PRE_PSI|
MALLOC_X| MALLOC_F_HAT| MALLOC_F|
FFTW_INIT,
FFTW_MEASURE);
/* precompute lin psi if set */
if(my_plan.flags & PRE_LIN_PSI)
nfft_precompute_lin_psi(&my_plan);
/* set the flags for the infft*/
if (weight)
infft_flags = infft_flags | PRECOMPUTE_WEIGHT;
/* initialise my_iplan, advanced */
solver_init_advanced_complex(&my_iplan,(nfft_mv_plan_complex*)&my_plan, infft_flags );
/* get the weights */
if(my_iplan.flags & PRECOMPUTE_WEIGHT)
{
fin=fopen("weights.dat","r");
for(j=0;j<my_plan.M_total;j++)
{
fscanf(fin,"%le ",&my_iplan.w[j]);
}
fclose(fin);
}
/* get the damping factors */
if(my_iplan.flags & PRECOMPUTE_DAMP)
{
for(j=0;j<N;j++){
for(k=0;k<N;k++) {
int j2= j-N/2;
int k2= k-N/2;
double r=sqrt(j2*j2+k2*k2);
if(r>(double) N/2)
my_iplan.w_hat[j*N+k]=0.0;
else
my_iplan.w_hat[j*N+k]=1.0;
}
}
}
/* open the input file */
fin=fopen(filename,"r");
/* read x,y,freal and fimag from the knots */
for(j=0;j<my_plan.M_total;j++)
{
fscanf(fin,"%le %le %le %le ",&my_plan.x[2*j+0],&my_plan.x[2*j+1],
&real,&imag);
my_iplan.y[j] = real + _Complex_I*imag;
}
fclose(fin);
/* precompute psi */
if(my_plan.flags & PRE_PSI)
nfft_precompute_psi(&my_plan);
/* precompute full psi */
if(my_plan.flags & PRE_FULL_PSI)
nfft_precompute_full_psi(&my_plan);
/* init some guess */
for(k=0;k<my_plan.N_total;k++)
my_iplan.f_hat_iter[k]=0.0;
t0 = nfft_clock_gettime_seconds();
/* inverse trafo */
solver_before_loop_complex(&my_iplan);
for(l=0;l<iteration;l++)
{
/* break if dot_r_iter is smaller than epsilon*/
if(my_iplan.dot_r_iter<epsilon)
break;
fprintf(stderr,"%e, %i of %i\n",sqrt(my_iplan.dot_r_iter),
l+1,iteration);
solver_loop_one_step_complex(&my_iplan);
}
t1 = nfft_clock_gettime_seconds();
t=t1-t0;
fout_real=fopen("output_real.dat","w");
fout_imag=fopen("output_imag.dat","w");
for(k=0;k<my_plan.N_total;k++) {
fprintf(fout_real,"%le ", creal(my_iplan.f_hat_iter[k]));
fprintf(fout_imag,"%le ", cimag(my_iplan.f_hat_iter[k]));
}
fclose(fout_real);
fclose(fout_imag);
/* finalize the infft */
solver_finalize_complex(&my_iplan);
/* finalize the nfft */
nfft_finalize(&my_plan);
}
int main(int argc, char **argv)
{
if (argc <= 5) {
printf("usage: ./reconstruct_data_2d FILENAME N M ITER WEIGHTS\n");
return 1;
}
reconstruct(argv[1],atoi(argv[2]),atoi(argv[3]),atoi(argv[4]),atoi(argv[5]));
return 1;
}
/* \} */
reconstruct
static void reconstruct(char *filename, int N, int M, int iteration, int weight)
reconstruct makes an inverse 2d nfft
Definition reconstruct_data_2d.c:33
MALLOC_F_HAT
#define MALLOC_F_HAT
Definition nfft3.h:188
MALLOC_X
#define MALLOC_X
Definition nfft3.h:187
nfft_precompute_lin_psi
void nfft_precompute_lin_psi(nfft_plan *ths)
nfft_finalize
void nfft_finalize(nfft_plan *ths)
PRE_FULL_PSI
#define PRE_FULL_PSI
Definition nfft3.h:186
PRE_PSI
#define PRE_PSI
Definition nfft3.h:185
MALLOC_F
#define MALLOC_F
Definition nfft3.h:189
PRE_LIN_PSI
#define PRE_LIN_PSI
Definition nfft3.h:183
FFTW_INIT
#define FFTW_INIT
Definition nfft3.h:191
PRE_PHI_HUT
#define PRE_PHI_HUT
Definition nfft3.h:181
nfft_precompute_psi
void nfft_precompute_psi(nfft_plan *ths)
nfft_precompute_full_psi
void nfft_precompute_full_psi(nfft_plan *ths)
CGNR
#define CGNR
Definition nfft3.h:802
PRECOMPUTE_DAMP
#define PRECOMPUTE_DAMP
Definition nfft3.h:806
PRECOMPUTE_WEIGHT
#define PRECOMPUTE_WEIGHT
Definition nfft3.h:805
nfft3.h
Header file for the nfft3 library.
nfft_mv_plan_complex
Definition nfft3.h:177
nfft_plan
solver_plan_complex
data structure for an inverse NFFT plan with double precision
Definition nfft3.h:796
solver_plan_complex::w
double * w
weighting factors
Definition nfft3.h:796
solver_plan_complex::flags
unsigned flags
iteration type
Definition nfft3.h:796
solver_plan_complex::w_hat
double * w_hat
damping factors
Definition nfft3.h:796
solver_plan_complex::dot_r_iter
double dot_r_iter
weighted dotproduct of r_iter
Definition nfft3.h:796
solver_plan_complex::y
fftw_complex * y
right hand side, samples
Definition nfft3.h:796
solver_plan_complex::f_hat_iter
fftw_complex * f_hat_iter
iterative solution
Definition nfft3.h:796