template/similarity_profile.hh
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/* -*- mia-c++ -*-
*
* This file is part of MIA - a toolbox for medical image analysis
* Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
*
* MIA is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with MIA; if not, see <http://www.gnu.org/licenses/>.
*
*/
#ifndef mia_internal_similarity_profile_hh
#define mia_internal_similarity_profile_hh
#include <mia/core/fft1d_r2c.hh>
#include <mia/core/import_handler.hh>
NS_MIA_BEGIN
template <int dim>
class EXPORT_HANDLER TSimilarityProfile
{
public:
typedef dimension_traits<dim> this_dim_trait;
typedef typename this_dim_trait::PFullCost PFullCost;
typedef typename this_dim_trait::ImageSeries ImageSeries;
typedef typename this_dim_trait::PImage PImage;
TSimilarityProfile(PFullCost cost, const ImageSeries& images,
size_t reference, size_t max_delta);
TSimilarityProfile(const TSimilarityProfile<dim>& org) = default;
TSimilarityProfile<dim>& operator = (const TSimilarityProfile<dim>& org) = default;
float get_peak_frequency() const;
std::vector<size_t> get_periodic_subset() const;
private:
size_t m_skip;
mutable float m_peak_freq;
mutable bool m_peak_freq_valid;
size_t m_reference;
size_t m_max_delta;
std::vector<CFFT1D_R2C::Real> m_cost_values;
};
NS_MIA_END
#endif
TSimilarityProfile< 2 >::PFullCost
this_dim_trait::PFullCost PFullCost
Definition template/similarity_profile.hh:47
TSimilarityProfile::get_periodic_subset
std::vector< size_t > get_periodic_subset() const
TSimilarityProfile< 2 >::PImage
this_dim_trait::PImage PImage
Definition template/similarity_profile.hh:53
TSimilarityProfile::get_peak_frequency
float get_peak_frequency() const
TSimilarityProfile< 2 >::ImageSeries
this_dim_trait::ImageSeries ImageSeries
Definition template/similarity_profile.hh:50
TSimilarityProfile::TSimilarityProfile
TSimilarityProfile(const TSimilarityProfile< dim > &org)=default
copy constructor
TSimilarityProfile< 2 >::this_dim_trait
dimension_traits< dim > this_dim_trait
Definition template/similarity_profile.hh:44
TSimilarityProfile::TSimilarityProfile
TSimilarityProfile(PFullCost cost, const ImageSeries &images, size_t reference, size_t max_delta)
EXPORT_HANDLER
#define EXPORT_HANDLER
Definition core/cost.hh:32
NS_MIA_BEGIN
#define NS_MIA_BEGIN
conveniance define to start the mia namespace
Definition defines.hh:33
NS_MIA_END
#define NS_MIA_END
conveniance define to end the mia namespace
Definition defines.hh:36
fft1d_r2c.hh
import_handler.hh