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GlfRecord Member List

This is the complete list of members for GlfRecord, including all inherited members.

getIndel1(std::string &indelSeq) | GlfRecord |
getIndel2(std::string &indelSeq) | GlfRecord |
getLk(int index) | GlfRecord |
getLkHet() | GlfRecord |
getLkHom1() | GlfRecord |
getLkHom2() | GlfRecord |
getMinDepth() const | GlfRecord |
getMinLk() const | GlfRecord |
getOffset() const | GlfRecord |
getReadDepth() const | GlfRecord |
getRecordType() const | GlfRecord | inline
getRefBase() const | GlfRecord | inline
getRefBaseChar() const | GlfRecord |
getRmsMapQ() const | GlfRecord |
GlfRecord() | GlfRecord |
indelLen1 (defined in GlfRecord) | GlfRecord |
indelLen2 (defined in GlfRecord) | GlfRecord |
lk (defined in GlfRecord) | GlfRecord |
lkHet (defined in GlfRecord) | GlfRecord |
lkHom1 (defined in GlfRecord) | GlfRecord |
lkHom2 (defined in GlfRecord) | GlfRecord |
min_depth (defined in GlfRecord) | GlfRecord |
offset (defined in GlfRecord) | GlfRecord |
print() const | GlfRecord |
read(IFILE filePtr) | GlfRecord |
reset() | GlfRecord |
rmsMapQ (defined in GlfRecord) | GlfRecord |
setDeletionIndel1(const std::string &indelSeq) | GlfRecord |
setDeletionIndel2(const std::string &indelSeq) | GlfRecord |
setInsertionIndel1(const std::string &indelSeq) | GlfRecord |
setInsertionIndel2(const std::string &indelSeq) | GlfRecord |
setLk(int index, uint8_t value) | GlfRecord |
setLkHet(uint8_t lk) | GlfRecord |
setLkHom1(uint8_t lk) | GlfRecord |
setLkHom2(uint8_t lk) | GlfRecord |
setMinDepth(uint32_t minDepth) | GlfRecord |
setMinLk(uint8_t minLk) | GlfRecord |
setOffset(uint32_t offset) | GlfRecord |
setReadDepth(uint32_t readDepth) | GlfRecord |
setRecordType(uint8_t recType) | GlfRecord |
setRefBaseInt(uint8_t refBase) | GlfRecord |
setRmsMapQ(uint8_t rmsMapQ) | GlfRecord |
setRtypeRef(uint8_t rtypeRef) | GlfRecord |
write(IFILE filePtr) const | GlfRecord |
~GlfRecord() | GlfRecord |