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SamValidator Member List

This is the complete list of members for SamValidator, including all inherited members.

isValid(SamFileHeader &samHeader, SamRecord &samRecord, SamValidationErrors &validationErrors) | SamValidator | static
isValid1BasedPos(int32_t pos, SamValidationErrors &validationErrors) | SamValidator | static
isValidCigar(SamRecord &samRecord, SamValidationErrors &validationErrors) | SamValidator | static
isValidCigar(const char *cigar, const char *sequence, SamValidationErrors &validationErrors) | SamValidator | static
isValidCigar(const char *cigar, int seqLen, SamValidationErrors &validationErrors) | SamValidator | static
isValidFlag(uint16_t flag, SamValidationErrors &validationErrors) | SamValidator | static
isValidIsize() | SamValidator | static
isValidMapQuality(uint8_t mapQuality, SamValidationErrors &validationErrors) | SamValidator | static
isValidMpos() | SamValidator | static
isValidMrnm() | SamValidator | static
isValidQname(const char *qname, uint8_t qnameLen, SamValidationErrors &validationErrors) | SamValidator | static
isValidQuality(SamRecord &samRecord, SamValidationErrors &validationErrors) | SamValidator | static
isValidQuality(const char *quality, const char *sequence, SamValidationErrors &validationErrors) | SamValidator | static
isValidQuality(const char *quality, int seqLength, SamValidationErrors &validationErrors) | SamValidator | static
isValidRefID(int32_t refID, const SamReferenceInfo &refInfo, SamValidationErrors &validationErrors) | SamValidator | static
isValidRname(SamFileHeader &samHeader, const char *rname, SamValidationErrors &validationErrors) | SamValidator | static
isValidRname(const char *rname, SamValidationErrors &validationErrors) | SamValidator | static
isValidSeq() | SamValidator | static
isValidSequence(SamRecord &samRecord, SamValidationErrors &validationErrors) | SamValidator | static
isValidTags(SamRecord &samRecord, SamValidationErrors &validationErrors) | SamValidator | static
isValidValue() | SamValidator | static
isValidVtype() | SamValidator | static